Dichomitus squalens: DICSQDRAFT_102468
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Entry
DICSQDRAFT_102468 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_102468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_102468
Spliceosome [BR:
dsq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
DICSQDRAFT_102468
Complex C
U5 SnRNP specific factors
DICSQDRAFT_102468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_Syf1_CNRKL1_N
TPR_16
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_C
TPR_2
ARM_TT21_N
TPR_8
ARM_TT21_2nd
TPR_6
TPR_9
TPR_11
ARM_TT21
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
18833375
NCBI-ProteinID:
XP_007363866
JGI:
102468
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MAANNKPNKLAFLSMPAPASYVAGLGRGASGFTTRSDIGPAREGPSAEAIAEAQARRGEE
AEVDPDQFQDPDNEYGLFAGTTYEADDEEADKIYEMVDKNMDARRRARREARENEELAKL
RAERPKIQQQFADLKRGLAQVTDEEWEGIPEVGNLTRKKRKRDERSFVVSDSVIVGDRAR
NEYETSLDARQQATGGFETPADAGTLTNFAEMSQARDKILSLKLDQVSGTATSGLQTSID
PKGYLTSLDSVVIKSDAEIGDIKRARMLFDSLVKSNPKHAPGWIAAARLEEHAGRMVAAR
KIIKQGCEQCPKSEDIWLEAARLHNNDDAKVILASAVQHVGQSVRIWMAAADLEHDVKAK
KRVLRKALEHIPNSVRLWKETVNLESSAQDARILLSRAVEVIPQSVELWLALARLETPDK
AKAVLNKARKAVPTSHEIWIAAGRLLEQEAYATEKSEEQRDKELSAVDKTIEAGVRELRR
HQVLLTREQWLKEAERCENEGAIRTCEAIIKATVAMDVEEEDRLDTWTSDAEAAEAKGNV
GVARAILAYALRVFPDKKSLWRKAADLEKAHGTKESLNAILERAVHHCPQAEVLWLMWAK
EKWLAGDVPAAREVLERAFVANSESEQIWLAAVKLEAENGELGVAKELLVRARTVADTQR
IWMKSAVFERQQGQLDNALETLVTAIKKYPKFAKLYMIQGQIHQQRKDFAAARASYAAGI
KACPKDVNLWILASRLEEADNKSIKARALLDKARLANPGNDVLWAEAVGVEERSGGTAQA
KTVLARGLQECPSSGLLWSMAIWSEPRPTRKARSADALRKAGNDPWVLCSVARLFWTERK
IEQARRWFDRAVAANEQPSDTWGDIWAWWLKFERQHGTKEQQEEVIEKAVAAEPRYGPTW
QPIAKDAANIHKSTREILELVAEALH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaacaacaagccaaacaagctggcttttttgtcgatgccagcgccggcctcg
tacgtcgccggtcttggtcgaggtgcctcgggcttcaccactcgttccgatattggaccc
gcgcgtgaaggtccttctgctgaagcaattgcagaggctcaagcaaggcgaggcgaggaa
gcggaagtggacccggaccagtttcaagatccagataacgaatatggtctcttcgctggg
actacatatgaggcggatgatgaggaggcggacaagatatatgaaatggtggataagaac
atggacgcaaggagacgggctcggagggaagcacgcgagaacgaggagctggccaagctc
cgagctgagcgtcccaagatccagcagcagttcgcggacctcaagcgcggactggcccag
gtcacggacgaagaatgggagggcattcctgaggtgggcaatcttacgaggaaaaagcgt
aaaagggacgagaggtcattcgttgtatccgacagcgtcattgtcggagacagggctagg
aatgagtacgagacgtcgttggatgctcgccagcaagcgactggcggttttgagacccct
gccgacgctggtactttgaccaacttcgcggagatgagccaagctcgtgacaagattctc
tcccttaagctcgaccaggtatccggtaccgctacttctggtttacaaacgtccattgac
ccgaaaggctacctcacctcgcttgatagcgttgtcatcaaatccgacgcggagattggc
gacataaagcgcgctcgtatgcttttcgactcgcttgtcaagtcgaaccccaagcacgcg
cctggatggatcgctgccgctcgtttggaggagcatgccggacgaatggtcgctgcgcgg
aagatcatcaagcagggctgcgaacaatgtccaaagagtgaagacatctggctagaggca
gcgcggttgcataacaacgatgacgcgaaagtcattctagcaagcgcagtgcagcacgtg
ggccagagtgtcaggatttggatggctgcggcggacctggagcacgacgtcaaagccaag
aagcgtgtcctccggaaagctctcgagcacattccgaactcggtacgcttgtggaaggaa
accgtcaacctcgagtcttctgcacaggatgcccgcattctcttgtctcgcgctgtcgaa
gtcatccctcagtcggtcgagctctggcttgcgcttgcacgcctcgagactcccgacaag
gccaaggccgttctcaataaggcccgcaaagctgttcctaccagtcacgagatttggatt
gcagccggacggctcctcgagcaggaagcctatgctactgagaaatcagaagagcaacgc
gacaaggagctttctgcggtcgacaagactatcgaggctggtgtgcgcgagcttcgccgc
catcaggtcctccttacgcgtgagcagtggctcaaggaagccgaacggtgcgagaacgag
ggcgcgatccggacgtgcgaggcgatcatcaaggccacggtcgccatggatgtcgaggaa
gaggaccgcctagacacttggaccagcgacgccgaggcggcggaggccaagggcaatgtc
ggagtcgctcgggccattctcgcctacgctcttcgcgtgtttccggacaagaagagtttg
tggcggaaggccgccgatctggagaaggcacatggcaccaaggaatcgttgaacgccatc
ctggagcgtgccgtccaccattgcccgcaggccgaggttctgtggctcatgtgggccaag
gaaaagtggctggctggagatgtgcctgctgcccgcgaggtactcgagcgtgccttcgtg
gcaaactcggagagcgagcagatctggcttgccgccgtcaagctggaagcggagaatggc
gagcttggcgtcgcgaaagagcttctcgttcgcgcccgaacggttgcggacactcaaagg
atctggatgaagtcggctgtgttcgaacgccagcaagggcagctcgacaatgcgctcgag
acgcttgtcacggcgatcaagaagtaccccaagttcgccaagctctacatgatccaaggg
cagatccaccagcagcggaaggacttcgccgcagcgcgtgcatcgtatgctgcgggcatc
aaggcatgccctaaggacgtcaacctctggatcctcgcgagtcgtctagaggaagctgac
aacaagagcatcaaggcgcgtgccttgttggacaaggcccgattggcgaaccctgggaat
gacgttctctgggctgaagccgtaggcgttgaggaacgcagcggtggcactgcgcaggcg
aagactgtgctggctagaggcctccaggagtgtccgtcttctggcctattgtggtcgatg
gccatctggtccgagcctcgcccgacgcgcaaagcgcgctcggctgacgcactgaggaag
gcgggcaacgatccatgggtgctctgcagcgtcgcgcgtctgttctggacagagcgcaag
atcgagcaggcacgtcgatggtttgaccgtgccgtcgcagcgaacgagcagccgagcgat
acttggggcgacatttgggcgtggtggctcaagtttgagcgtcagcatggcacaaaggag
caacaagaggaggtcatcgagaaggcagtcgctgcagagcctcggtacggaccgacgtgg
cagcctatcgccaaagacgctgctaacatacacaagagcacaagggagatcctcgagctc
gtggcagaggcgttgcactaa
DBGET
integrated database retrieval system
