Dichomitus squalens: DICSQDRAFT_103942
Help
Entry
DICSQDRAFT_103942 CDS
T03133
Name
(RefSeq) pre-mRNA splicing factor
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_103942
Enzymes [BR:
dsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DICSQDRAFT_103942
Spliceosome [BR:
dsq03041
]
Complex C
Other components
Complex C specific factors
DICSQDRAFT_103942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_30
nSTAND3
AAA_19
HA2_N
AAA_16
T2SSE
SRP54
ABC_tran
AAA_29
Zeta_toxin
ResIII
AAA_23
Motif
Other DBs
NCBI-GeneID:
18833482
NCBI-ProteinID:
XP_007364597
JGI:
103942
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MSGIQFWKPGTVGPGSNLDRATETEDNIVQSAPSSLSLQAARERLPIYQHKQSLLYAVEK
HGVVVLVGQTGSGKTTQLPQFLYEAGWANEGNVIACTQPRRVAATSVANRVAAEVGTSLG
EEVGYTIRFEDVSDKERTRILYMTDGMLFRETLVDPLLSRYSVIMIDEAHERSVYTDLLL
GILKKIRRKRPSLRLVVSSATLDAAAFLDFFTSGNSPNEATIVSLEGRAYPVQIAYLQEP
VPDYVQKAAEVVWSIHQQPTSGDILVFLSGREEIDRCIDRLAEMLPTLPRNAKRLALLAL
HAGLTTEEQLKVFEPAERGFRKVIIATNIAEASVTIEGIKFVVDSGFAKASMEYSQYIRT
YNPSTAMSSLTTAPISQASATQRAGRAGRTSAGYCYRLYTERSFEQLRQTTPPEITRTDL
TTPIIQLKSLGIDDLMKFEWLSSPPAESVLRALEGLVNAGMIGENGRLTVIGEKVAECPV
EVNIARMLFASKQYQCGEEILTIAAMTAVQDVFIIPEGSAGAIAELERRKFTAEEGDHLT
LLNAFNAFTRYGRSSSWCKAHALSFRAMSRAVSIRSQLKKYMQRFELPLDSCEGDAKRLR
KCLVTGYWRNVARWTADGTYRAVRGEIVLHVHPHSVLFTRKPRTQWVIFHEMEETKKTQI
RVLTEIEPDWLLEHGHAYHDRHPITSLASQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaattcagttttggaagccaggcactgtcggtccaggaagcaaccttgacaga
gcaacggagaccgaagataacatcgttcagagcgcaccttcttccctctctctccaagcc
gcgcgggagcgtttgcccatctaccaacacaagcagagtctgctgtatgccgttgagaag
catggcgtagtcgttttggtcggccagaccggcagtggcaaaaccacccaattacctcag
ttcctgtacgaagcagggtgggccaacgaaggaaacgtcattgcttgtactcagcctcgc
agagtagcagctacatctgtggcgaaccgcgtggctgcagaagtcggtacatctttgggc
gaagaggttggctacacaatccgctttgaagatgtcagtgacaaagaacgcacacgaatc
ctctacatgacagacggaatgctcttccgggagacactcgtcgatccgttgctcagccgt
tatagtgtcatcatgatcgacgaggctcatgaacgaagcgtgtacacggacctactcctt
gggatactgaaaaaaattcgtcggaaacggccctcattacggctggtggtgtcgtcagct
actctggatgcggctgcatttctcgacttcttcacttctggaaacagccctaatgaagcg
accattgtcagcttggaaggtcgcgcatatcctgtacaaatagcctacctacaggagcct
gtgccagactacgttcagaaggctgcagaagtggtctggagcatccaccagcagccaact
tctggagatatcctggtcttcttgagcggccgcgaggaaatagatcgttgcattgatcga
ctggcagagatgctaccaaccctaccacggaatgccaaacgcttggccttacttgctcta
cacgcaggtctaacgacggaagagcaactcaaagtttttgaaccggctgagcgtggattc
aggaaagtgatcatagcaaccaacatcgccgaggccagcgtcaccatcgaaggaatcaag
tttgtagtcgactctggattcgccaaagcaagtatggaatacagtcaatatatacgcacc
tacaatccctcgaccgctatgtcatctctcactaccgctcccatttcgcaagcctcagct
actcagcgggctggccgcgcgggacgtacctccgccggctactgttaccgtctgtacacg
gagcgctcctttgagcagttaagacagacaacgcctccggagatcactcgaaccgatctt
actacgcccatcattcagctgaagtcgcttggtatcgacgacctcatgaagtttgaatgg
ttgtcctctccgccggctgagagcgtcctgcgagctctagagggtctagtgaatgctgga
atgatcggcgagaatgggcggctcaccgtcattggagaaaaagtggcggagtgtcctgtt
gaggtcaacattgcacgtatgttattcgcctcaaagcagtatcagtgcggagaagaaata
ctcacaattgcggcgatgactgccgtacaggacgtgttcatcatcccagagggttctgca
ggtgcgatagctgagcttgaacgaaggaaattcacggcagaggaaggagaccatttgact
ctcttgaatgcctttaatgcgttcacgcgttatggccgttcttcatcgtggtgcaaggcg
catgcactgtcattccgtgcaatgtctcgtgccgtatcaatacgatcacagttgaagaaa
tatatgcagcggtttgagctccctctagacagttgtgagggggatgcgaaacgactacgg
aagtgtctcgtaaccggatactggcgaaatgtcgcccgatggaccgccgatggcacctat
agggctgtgcgaggagagattgttctacatgttcatcctcactccgtgctgtttacgagg
aagcctcggactcaatgggtgattttccacgaaatggaagagacgaaaaagacacagatc
cgcgtgttgacggagatcgaaccggattggttgctcgagcatggtcacgcgtatcatgat
aggcatcctataactagcctggcctctcaatag
DBGET
integrated database retrieval system
