Dichomitus squalens: DICSQDRAFT_103963
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Entry
DICSQDRAFT_103963 CDS
T03133
Name
(RefSeq) WD40 repeat-like protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
dsq
Dichomitus squalens
Pathway
dsq04111
Cell cycle - yeast
dsq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DICSQDRAFT_103963
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
DICSQDRAFT_103963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsq04121
]
DICSQDRAFT_103963
Ubiquitin system [BR:
dsq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
DICSQDRAFT_103963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_SCAP
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
F-box-like
Beta-prop_EML_2
Beta-prop_EML
ASA1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_RIG_2nd
NBCH_WD40
F-box
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT140_1st
F-box_4
Beta-prop_WDR19_1st
TRM82_WD
DBF4_BRCT
Motif
Other DBs
NCBI-GeneID:
18833485
NCBI-ProteinID:
XP_007364625
JGI:
103963
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MSAPSLAGNSSAYVCDTLPPPRLAGDKSCSRSPSPSPVSPSAITTFDPPIIASSQEPPAL
SPMESSTVKDEDAKQADSGAAPTQPPARKLCVRHQRMADEGTNLKLQQALDALPVAEREA
VSVIWSNFSSSPHPRRALILHGLLTMCCFSQLSLLTEQLAHLIRIDPFAILPREVSLKIL
GYLDATSLCRAAQVSRQWRGLADDDILWRGICEQHIGQKCLKCGWGLPILEKRRAVRLPT
ASPCPEPVAVPQSSSQGPSSQGSSSQASSASSHSHLKRRLDAHAAGASTTKKARLETPEH
GSRPATPSSSQNTTLSISSTEDPVASGSTSPNPLLAPSSRAPAVDFRTRPWKDVYCERLT
IERNWRRGRCTVRTLKGHTDGVMCLQFSETLSHPSFPILITGSYDRTARVWNLETGTEVQ
CLSGHTRAIRALQFDEAKLITGSMDHTMRVWNWRTGQCLKVLEGHTEGVVCLRYDSNVLA
SGSVDTTVKVWNFRTGECFTLRGHCDWVNAVQLWDSTGTSSSCDTSLTAFENTPTSYAGS
APHIDPGKMLFSASDDGTIRLWDLCARACVRQFKGHVGQVQSLKLLMVDEGCESSAGSEG
SSDREASVEPQESCSSSPSASSSPLPSSPVPTSSSTRPVPALSRQNTRERSSRQKPVLIS
GSLDNTIKIWDIDTGKVQRTLFGHIEGVWAVASDKLRLVSGSHDRTIKVWNREEGACTAT
LVGHRGAVTCLALGEDKIVSGSDDGDIRLWSFGG
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccctctctcgcgggcaacagctccgcctacgtctgcgatactcttccgcct
ccccgtctcgccggcgacaagtcttgctctcgctctcccagtccctctcctgtgtccccg
tccgccattaccaccttcgacccaccaatcatcgcgtcgtcacaggagccaccggcactg
tcacctatggagtcttcgaccgtgaaggacgaggacgcgaagcaggccgatagtggtgcg
gcccctactcagcctcccgcgcgcaagctatgcgttcgccatcagcggatggcggacgag
ggcaccaacttgaaactccagcaggcacttgatgcactccccgtcgcagagcgcgaggcc
gtctccgtcatctggtccaacttctcatcatccccacatccccgccgcgcccttatcctc
catggtctcctcaccatgtgctgtttctcccagctgtcccttctcaccgagcagctcgcc
cacctgatccgcatcgacccgttcgccatcctcccgcgcgaagtctcgctcaagatcctc
ggctatcttgatgctacctcgctctgccgggccgctcaggtgagccgccagtggaggggt
ctggccgacgacgatatcctttggagggggatctgcgagcagcatattggacagaagtgc
ttgaagtgcggatgggggctccctatcttggagaagcgaagggcggtacgactcccgacg
gcttccccgtgtccagagcctgttgcggtccctcagtcctcttcgcaggggccttcttcg
caggggtcgtcttcgcaagcatcgtccgcgtcctcccattcccacctaaagcgacggctc
gacgcgcacgcagcaggggcctctactaccaaaaaggccagactggaaactcctgagcac
ggctcgcgacccgcgaccccctcttcgtcgcagaatacgactctttctatctcctccacc
gaagaccccgttgcttcgggttccacgagcccgaatccgcttctcgcgccatcctccagg
gctccggcggtcgacttccgcacccggccatggaaagacgtctattgcgaacgccttacc
atcgagcgcaactggcggcgcgggcgttgtaccgtgcgtacgctcaaaggacacaccgat
ggagtgatgtgtttgcagttcagcgaaacgctttcccatccgtccttccccatcctcatc
accggctcgtacgaccgcaccgcccgcgtctggaacctggagacaggcaccgaagtgcag
tgtctgtcagggcacactcgcgcgatccgggcgctgcagttcgacgaggcgaagctgatc
actggcagtatggatcatacgatgcgggtgtggaattggcggacggggcagtgtctgaag
gtcttggaaggacacacggaaggcgtggtgtgtctccggtacgactccaacgtcctggcg
agcgggtccgtcgacactaccgtgaaggtgtggaacttccggacgggcgagtgcttcacg
ctccgtgggcattgcgactgggtcaacgctgtccaactctgggattcgaccggcacctcc
tcgtcgtgcgacacttcgttaactgcgtttgagaatacccccacctcttacgccggctcg
gctccccacatcgacccgggcaagatgctcttctcggcttcggacgacggcactatccgc
ctctgggacctgtgcgcacgtgcgtgcgtgcgccagttcaagggccacgtcggccaagtg
cagagcctgaagcttctcatggtcgacgagggctgcgagtcctcggccgggtccgaagga
agctcggaccgcgaggcgtcggtcgagccccaagagtcctgttcctccagcccctcggct
tcctcgtcccctctcccctcttctcccgttcccacctcctcttctactaggcccgtcccc
gcactttcccggcagaacacccgggagcgatcgtcgcggcagaagcccgtccttatctca
ggcagcctcgataatacgataaagatctgggatattgacaccggcaaggtccagcgtacg
ctcttcgggcacatcgagggcgtatgggctgtcgcgagcgataagctccggctggtgagc
ggcagccacgatcgtacgatcaaggtctggaaccgagaagagggtgcgtgcacggcgacg
cttgtcggtcaccggggcgccgttacgtgtctcgctctcggcgaagataagatagtctcg
ggcagcgacgacggcgacatacggctctggagcttcggcgggtag
DBGET
integrated database retrieval system