Dichomitus squalens: DICSQDRAFT_104056
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Entry
DICSQDRAFT_104056 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_104056
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
DICSQDRAFT_104056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_Ribbon_TF
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
18833491
NCBI-ProteinID:
XP_007364677
JGI:
104056
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MSGRCEECGASTVWDADVGSAICLQCGTLADPTQSVLASHLENTDVSGREYAPWANIPGG
STLRGRNGWALSGQGKESRDRKNTIAMHEFIRTIATRLSNPGLTTRAQGVFDQAMRLGEY
RWGRKAKLTAGAALAIALRESHKSDSIRDIAYLLDEPPVAISRAFTKVIALLQLGLSTTD
PAVHLPVLQTYLVSLLDGSGGAAAALPAQLVKVLSPLIPRFPSVIHTATALSSLLARTHT
FAHLPTAPTACALFMLALEAELSSSLPNAGAFAPILGARLGAGKGVVMQRYKQIYDLVEE
WIREVPWLDAHERKRAKGREGEGRSKVAKRVVVARGLKDVVRFQEEIWRKRVEHEGRPLV
RLELDEKDAGASGSGDERDGSEAGGRSPRGTSVLGDDTPPRKKAKPRHPRTVVDASQFLL
NPLSTAISSPPPVPVAGPPDLLTHLLTADASSLPHAFACAPTRLQLLASARGGTEERHIT
DEELFAEDELEGLMRSPEEAEAVRIAMGWDVESDDEEHDGGNVPVEKSSAKGKKRKRKSP
AGEDVDEGNGSEPRGSKKINMEALARLLNPDGDFDDGEEEIGVGSYHEAGNVQHGAAGEE
VVGEWRPPSPGGGHSEDWFEF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaagatgtgaagagtgcggtgcatccacagtatgggacgcagacgtcggttcc
gccatctgcctacagtgcggtacgctcgccgacccgacacaaagcgtgctcgcgtcgcac
ctcgagaatacagatgtatccggtcgcgaatatgcgccctgggctaacatacccgggggg
agcacgctgcgagggcgaaacggctgggcactgtccggccagggaaaggagtcgcgggat
cgcaagaacacgatcgctatgcacgagttcatacgaactattgccacgcgtctctcaaat
cccgggttgaccacccgcgcgcaaggcgtattcgatcaggccatgcgtctcggagagtat
cgctggggccgcaaagccaagctcaccgcaggcgccgcactcgccatcgctctgcgcgag
tctcacaaaagcgactccatccgtgacattgcatacctgctcgacgaaccgccagtggca
atctcccgcgcgttcaccaaggtcatagcgctgctccagctcggcctgtccaccaccgac
cccgccgtccatctcccggtgctccagacgtacctcgtgtccctgctcgacggctcaggc
ggcgcggccgctgcactgcctgcgcagctcgtaaaggtgctttctcctctcattccgcgc
ttccccagtgttatccataccgcgacagcgctctcaagtctgcttgcacgcacgcacacc
ttcgcccacctccccacggcgccgaccgcgtgcgcgctgttcatgctcgccctcgaagct
gagctctcgtcatcgctgccgaacgccggtgcgttcgctccgatactcggtgcacgtctg
ggggccggcaagggcgtggtaatgcagcggtacaagcagatctatgacctcgtagaggaa
tggatccgggaggtgccctggctcgacgcgcacgagcgcaagcgggccaaaggcagggaa
ggcgaggggcgttccaaggtcgcgaagcgcgtcgtcgtcgcccgcgggctcaaggacgtc
gtgcggttccaggaagagatctggcggaagcgagtcgagcacgaggggaggccgctcgtc
cggctcgaactcgacgagaaggacgcgggcgcgagtggcagcggagacgagcgtgacgga
agcgaggctggcggaaggtccccgcgggggacgtccgtccttggggacgacacccctcct
cggaagaaggccaagccgcgccacccgaggactgtcgtcgatgcttcgcagtttctcctc
aacccgctctcgacggcgatatcgtcgccgccgccagtccccgtcgctggtccgcccgac
ttgctcacgcatcttctcacggcggacgcgtcttctctgccgcatgcgttcgcttgtgcg
cccactcgcctgcagctgcttgcgtccgcgcggggagggacggaggagcggcacatcacc
gatgaggagctgttcgccgaggacgagctcgaggggctcatgcgctcgccagaggaagcc
gaggccgttcggatcgccatgggatgggacgtcgagagcgacgacgaggagcacgatggt
gggaacgtcccggtggagaaatcgtcagcgaaagggaagaagcggaagagaaagtcgccg
gcaggagaagacgtcgatgaggggaacgggtcggagccacgaggctcgaagaagattaac
atggaagcgttggccaggctgctgaacccggacggcgacttcgatgatggggaagaggaa
atcggcgtgggcagctaccacgaggctgggaacgtccagcatggtgcagccggcgaagaa
gtcgttggagagtggcgtcctccatcgccgggaggaggacactcagaagactggtttgag
ttttga
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