Dichomitus squalens: DICSQDRAFT_104106
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Entry
DICSQDRAFT_104106 CDS
T03133
Name
(RefSeq) SNF2 chromatin remodeling protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_104106
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
DICSQDRAFT_104106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
ResIII
HEAT_GCN1
HEAT_EF3_N
TOR1L1_N
UTP20
mTOR_dom
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
18833494
NCBI-ProteinID:
XP_007364703
JGI:
104106
LinkDB
All DBs
Position
Unknown
AA seq
1944 aa
AA seq
DB search
MTSRLDRLLLLLDTGSSASVRITAAKQLAQLAAKSVISDVALVEDDVKTTRNHVLISDSS
GWSELMAVVARILPYLHSRSHETRSAASTALSQIFSLVPLWKPCPDADTKPYGASAVLPP
PEFPSFSVRELMEKGTLLLASSGKEFQKPTGILANSNEVKKARKEAMGRLGLDFLESVGG
ADDMDLDKELAADEPDTDVDMAAPVLVNTEEDAAPSSPTDDYVDVKVKKEDSVPVFGRSN
SSTPQLAASPAPVTSAAEDTSALSARERNRLKRKRKPGNAAVVGALPPTQASGAKYQAMA
AGGSKARLVARDEQPSSKQRLDSPKSPVEGPSQDRVVIDPTKGGAVAPKTESKSKALEVQ
PGTWVWDGLVKLLEVDLFSAAWEVRHGAAMALREVLKLQGKYGGTKVDLSWDENLIAHER
WCNDLAIKFLCIFVLDRFGDFVSDQVVAPVRETVSQTLASLLLHMPRRSVLHVHNVLLQM
IRQDFPIPVKPTNGKSFNKHNDKSHVWEVRHAGLLGIKYEVAVRSDLVSLDVPEGDCMEV
DDGKEVLRGVVDAAVLGLGDRDDDVRSVAASCLLPVAAYLVERLPEELSRVLAVLWSCLS
DMKDDLSSSVGAVMDLLGQLVTKNRVIEIIADESRSHPITVLAPTLFPFFRHTIANVRLA
VVKTLHTFMTVESLPRGWISVPFLRLLFQNLVVEERSDIRDATLTTWREVLSILSQTSGW
LESSIAQPLLLEWYGVLMTPLGLALDATSFYDPNLSDNSAPTERHNVDKNMLAQDLSLVP
VEVVMQARLAASAALAHIIAFWPSSPAPGSLSVDDTFRPILTHYIDSTSMLQKFLAAIIA
ECWAREYDIRAPPDSALLIEVSPLAAELSQKTLAFLQADPPAAYHEMAFTLARIHGECHN
LLQSFMFDCKLPASAIPSLGTEIDVTGTKPECFTIETAQAAVGPMFDKLKDSLGRTKKRE
LAIIKDKRLKVVSSIERYIEVKAQYDVRVAAAFAAAFVAFKSTPDKVSPIVKGIMNSVKN
EENLDLQTHSAAAVAAFVEFCVNRVLTQPPEKIVKNLCTFLCQDVDQTPTFLHNRKTLHG
VLSFNKQASAPQNGRDHANPTEDPAKAKLSRRGARLAFEKLSAKFGPKLLDAIPRMWPAI
AGGLMSACSGDSVSAMDEKIEKREGQDVIDSLSVLEAVVPTFHEDLSYHFVQLFPHVTLA
LRSRFAIVRQSAARCFATICDVLTLDAMRYVIEKVVPFLGDASTLANRQGAVELIYHIVQ
KLDIKALPYVIFMVVPVLGRMSDPDDDVRATATNTFASLVKMVPLEAGLPDPPNFPEDLL
KRREEERQFLMQLLDGSKVEQYNIPVTIKAELRKYQQEGVNWLAFLAKYQLHGILCDDMG
LGKTLQSICILASKHHERAQKYKETKSPDSKHLPSLIVCPPTLTGHWYYEILKYTENLKP
VLYTGNSRERYKLLGKLKTYDVVVTSYEVVRNDISSLQDINWHYCILDEGHIIKNAKTKL
TKAVKQVKAVHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEGSFNERFSKPILSNRDGK
AKTGEAAALALEALHKQVLPFLLRRLKEDVLNDLPPKIIQDYYCELSELQKFLYDDFSKS
RAKIQAEDVVRSNKEKDGEQTHVFQSLQYLRKLCNHPALVFKNDKEAIKDALTKSAINAS
SGDLSDIQHAPKLQALRQLLLDCGIGLAPSATGDTTKSELLDTEETATGAFSQHRVLIFC
QMKQMLDIIETDLFKQHMPSVTYMRLDGSTDAKKRHAVVQTFNSDPSIDCLLLTTHVGGL
GLTLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITKGTLEEKIMGLQRFK
LNIANSIVTQQNSGLASMDTDLVLDLFKRTTEEEDAAAAKKKDKDASGAPPGQRNVLRGL
EDLPPEEEYQELDLKSFMGSIGRK
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccagattggaccgactcctgttactacttgacacggggtcgtcagcgtccgtc
agaatcaccgcagccaaacaactagcacaacttgccgccaagagtgtgatcagcgatgtc
gcactcgtcgaagacgatgtgaagaccacacgaaaccatgtgttgatcagcgactcttct
ggctggtccgagcttatggccgtagttgcgagaatactgccatacctgcattcaagatct
catgagacgcgatcggcagcgtccactgccctttcgcagatcttctctctcgtccctctc
tggaagccctgcccagatgcggacacgaagccgtacggcgcgtccgccgtactgccccct
ccagaattcccttccttctctgttcgcgagctcatggagaagggcaccctcctccttgcg
tcctcgggcaaggagtttcagaagccgaccggcatcctcgccaactcgaacgaagtcaag
aaggcgcgcaaggaggccatgggccgccttggcctcgacttcctcgaaagcgtgggcggc
gcggacgacatggacctcgacaaggagctcgccgcggatgagcccgatacggacgtcgac
atggccgcccctgtactggtgaacacggaggaggacgccgcacccagttcgccaaccgat
gactacgtggacgttaaggtgaagaaggaggactcggtcccggtattcggacggtcaaat
tcttcgacgccccagctcgccgcttctcccgcgccggtaacatccgccgcggaagacacc
tccgcgctctctgctcgagagcgaaaccgactgaagcggaagcggaagccgggcaatgct
gccgtcgtcggcgcgcttccgcctacgcaggcttccggtgcaaagtaccaggcgatggcc
gctggcggaagcaaggcgcgccttgtggctcgtgacgaacagccctcgtcgaagcagcgt
ttggacagcccaaagtctccagtagaaggtccatcgcaagaccgtgtcgtcatcgatccg
acgaagggcggtgccgtcgccccgaagacagagagcaagtcgaaggcgcttgaggtacag
cctgggacatgggtctgggatggcctcgttaagctacttgaggtggacctgttcagcgct
gcttgggaagtacgacatggtgccgccatggcccttcgagaagtattgaagcttcaggga
aagtatggaggaacgaaagtggacctgtcttgggacgagaacctgatcgcccacgagagg
tggtgtaacgacctcgctatcaagtttctatgcatattcgtcctcgatcgattcggagac
ttcgtctcagatcaggtcgtcgctcccgtgcgcgagacggtttcacagacgctcgcgtcc
cttctgctgcacatgcctcgaagatcagttctccatgtgcacaacgttcttctacagatg
atccggcaagactttccaatccctgtcaagccgacgaacggcaagtcattcaacaagcac
aacgacaagagccacgtgtgggaggtgcgacatgcgggtctactgggcatcaagtacgag
gtcgctgtgaggagcgatctcgtaagcttggacgttcccgagggtgactgcatggaggtt
gatgatgggaaggaggtgttaaggggcgtcgtagatgctgcggtactaggccttggtgat
cgcgacgatgacgtgcggtcggtggcagcttcctgcttgcttccggtggctgcgtacctg
gtggagcgcttgcctgaagagctaagtcgagtgcttgctgtcctctggagctgtctgagc
gacatgaaggacgacctcagttcgagtgtcggggcagtcatggacttattgggtcaacta
gtgacgaagaaccgggtgatcgaaatcatcgccgacgaatcgcgatcacatcctatcacg
gtccttgcacccaccctcttccccttcttcaggcatacgatcgccaacgtgcggctagcc
gtcgtcaagactctccacacgttcatgacggtagagtcactaccccgagggtggatctct
gtacccttcctccgtctactctttcagaatctcgtcgtggaagagcgctctgacattcgg
gacgcgacgctgaccacctggcgtgaggttctatccatcttaagccagaccagtggctgg
ctcgagtcgtcgattgcgcagccgcttctcttggagtggtacggggtacttatgacgccg
ctcggtctcgcattggacgcgacatccttctatgaccctaacctcagcgacaacagcgcc
ccgaccgagaggcataatgtcgacaagaatatgcttgcacaagacttgtcccttgtgcct
gtcgaggtagtcatgcaggcaagattggccgcgtcggcggcgctagcgcacatcatcgct
ttctggccgtcttcgccagcacctggatcgctatccgttgacgacacgttccgtcccatc
ctgacacattacatcgactctacgagcatgctccagaagttccttgccgccatcatcgcc
gaatgctgggcgcgcgagtacgacatccgcgctcccccagatagcgctctcctcatcgag
gtttctccgcttgccgccgagctcagccagaagaccctcgcattcctccaggcggatcct
ccagcagcgtatcacgagatggcgttcacgcttgcgcgcatccacggcgagtgccacaac
ctcctgcagtccttcatgttcgattgcaagcttcccgcctctgccattccgtcgcttggc
acagagatcgacgtcacgggtacaaagcccgaatgtttcacgatcgagacagcccaagca
gccgtggggccgatgttcgataagctcaaagacagcttgggccggacgaagaagcgcgaa
ttggcgatcatcaaggacaagcggctcaaggtagtatcgagcatcgaacggtacatcgaa
gtcaaggcgcagtatgatgtcagagttgcggcggccttcgctgctgcgttcgtggcgttc
aagagcactccagacaaggtcagcccgattgtcaagggcatcatgaacagcgtcaagaac
gaggagaatttggacctacaaacccattctgcagcggcagttgcggccttcgtcgaattt
tgcgtcaatcgcgttctcactcagcctccggaaaagattgtcaagaacctgtgtaccttc
ctgtgccaggacgtcgaccagacgcccacattcctgcacaacaggaagacgcttcatggc
gttctgtcgttcaacaagcaggcctcggcaccgcagaacggcagggatcacgcgaatccc
acggaagatcctgcgaaagctaagctgtctcgtcgcggagcacgacttgccttcgagaaa
ctctccgcgaagttcggaccgaagcttttggatgccattccgagaatgtggcctgcgatt
gctgggggtttgatgagcgcatgctctggagactctgtcagcgcaatggacgaaaagatc
gagaagcgagaaggccaggacgtcatcgattcactaagtgtcctggaggctgttgtgccc
accttccacgaagatctatcgtatcacttcgtccagctgtttccgcatgtcaccctcgcc
cttcgcagccgtttcgctatcgttcggcagtccgcggctcggtgcttcgcaaccatctgc
gacgtgctgactttggacgcgatgcgctacgtcatcgagaaggttgtaccgttcctcggc
gacgcctctacattggcgaaccgtcagggtgctgtcgagttaatatatcacatcgtccaa
aagctcgatatcaaggcgcttccctacgtcatcttcatggtcgtgcctgtgctcggacgt
atgagcgacccggatgatgatgtgcgtgcgactgccacaaatacgttcgcatcgctggtg
aagatggttccgctcgaagcgggattgccggatccgccaaatttcccggaggacttgctc
aagcgtcgggaggaggagcgtcagttcctgatgcaacttctcgacggcagcaaggtggag
cagtacaacatccctgtcacaatcaaggccgagctgcgcaagtaccagcaggagggcgtc
aactggctcgcgtttctcgcaaagtaccagctccatggcattctctgtgatgacatgggt
ctcggaaagacgctccagtcgatatgcatattggcgagcaagcaccacgagcgcgcgcag
aagtataaggagaccaagtcgcctgactcaaaacatctcccctcactcattgtctgtccg
ccgacgcttactgggcactggtactacgagatcctcaagtacacagagaacctcaagccc
gtgctctacaccggtaactcgcgagaacggtacaagcttctaggcaagctgaagacgtat
gacgtcgtcgttacgtcttacgaagtcgttcgaaacgacatcagcagcctccaggacatc
aattggcactactgcatccttgatgagggccacatcatcaagaatgccaagacgaagttg
acgaaagccgtcaagcaggttaaggctgtccaccgactcatcttgtccggcactcccatt
cagaacaacgtcctcgaattgtggagtctttttgacttcctgatgcccggtttccttggc
accgagggatctttcaacgagcgcttctccaaaccgatattgtcgaatcgcgatggcaaa
gccaagacgggcgaggctgctgccctggcactcgaagctctgcacaagcaagtcttaccg
ttccttctccggcgactcaaggaggacgtgctcaacgacctgccgcccaagatcatccag
gactactactgcgaactctcagaactacagaagttcttgtacgacgacttctccaagtcg
cgagccaagatacaggcagaggatgtcgttcgatcaaacaaggagaaggacggcgagcag
acacacgtctttcagtcactacagtatctccggaagctctgcaatcatcccgccctcgtc
ttcaagaacgacaaggaggcaatcaaggacgctctcacaaagtccgccatcaatgcctca
tctggcgatctcagcgatattcagcatgctcccaagttgcaagctcttcggcaacttctt
ctcgattgcggcattggtctcgcgcccagtgctacaggcgacacgacgaagtccgagctc
ctggacacagaagagacagcgacaggagcattctcgcagcatcgtgtgctcatcttctgc
cagatgaagcagatgctcgacatcatcgagacagacttgttcaaacagcatatgccctct
gtcacctacatgcgtctcgacggctccaccgacgccaaaaagcgtcacgcggtagttcag
accttcaactcggatcccagtatcgattgtctcctgctaacgacgcacgttggtggcctg
ggtctcaccctcactggcgctgacactgtcatcttcgtcgagcacgactggaacccaatg
aaggacttgcaggccatggatcgtgcacatcggattgggcagaagaaggtggttaatgtg
tatcgcctgatcacgaagggcactctggaagagaagatcatgggtctgcagcgcttcaag
ctcaacatcgccaactctatcgttacgcagcaaaactcaggattggcgtcgatggacacc
gatctcgtcctcgacctcttcaagcgaacgacagaagaagaggacgccgcggccgcaaag
aagaaagacaaggacgcgagcggtgcgccacctggccagaggaacgtcctgcgcgggctc
gaggacctgccgcccgaagaagagtaccaagagctggacctcaaaagcttcatgggctcg
atcggcaggaagtag
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integrated database retrieval system
