KEGG   Dichomitus squalens: DICSQDRAFT_105537
Entry
DICSQDRAFT_105537 CDS       T03133                                 
Name
(RefSeq) SNF5-domain-containing protein
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
dsq  Dichomitus squalens
Pathway
dsq03082  ATP-dependent chromatin remodeling
dsq03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    DICSQDRAFT_105537
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    DICSQDRAFT_105537
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dsq01009]
    DICSQDRAFT_105537
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsq03021]
    DICSQDRAFT_105537
   03036 Chromosome and associated proteins [BR:dsq03036]
    DICSQDRAFT_105537
Protein phosphatases and associated proteins [BR:dsq01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     DICSQDRAFT_105537
Transcription machinery [BR:dsq03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     DICSQDRAFT_105537
    SWI/SNF complex
     DICSQDRAFT_105537
Chromosome and associated proteins [BR:dsq03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    DICSQDRAFT_105537
   PBAF complex
    DICSQDRAFT_105537
   SWI/SNF complex
    DICSQDRAFT_105537
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 18833588
NCBI-ProteinID: XP_007365537
JGI: 105537
UniProt: R7T0F9
LinkDB
Position
Unknown
AA seq 1044 aa
MPIAPAPVPAGAQAPGSPHVGMKRKASETPAPARTSTPASGNIPLAGAGTPGPQMARTYS
ATGIAGMGITGNVGPAQQQGLSQNSSASSLMGGAGGGMMPPPVLPRQGQAGDGMNIGMGL
RSTMPGQAQNVNANLVPGVGAGSPSASLNLGGLDGGSAVGPVPPQTPRQNSLPPAAASPY
QQIGSPGVNVPGMIGGTPTKPVVVKPGTSPAPTVSPAQQQQQQTVTVTKTQIVPQLPPLP
ATVQLEQKVTQVSVVPLADSEKAIPPLSAEEIARVQAWQQADRDYEVRRKKMLERVQEEM
KKTVSAPRAWWEKDFSLGGVGEEQLKRRRGDKWTLTGLKAQKEREMKDKKRMGKREGLRL
PRRISDEDAQRPEQLVPIRLEFDVEHHKMRDTFVWNLNDPIITPEVFAQSVVDDYQLTPS
YHAIITKSIQEQLSDYKAHSATFGEDGAMIDEAEDIMHGKFSEAEAAWWEAWRKRVRSRA
LYKLPNPPDPRTRKRRKVVKDETVEQPTAAVPPSGDVPMTVDDFEEDENLMHEEMRILVK
LDIIAGSYKLEDQFEWDLENVDPTPEQFAEIYCKDLGLGGEFKTAIAHSIREQVQIYQKS
LFLVGHPSDGSAVQDDDLRMSLLPSLISGARSMEQVSAFTPQLNYLSESELEKNEKDREK
ELARRKRKTTRGRRGVALPDREPPKTYRTPAIGFPEISPAALALAAAAAAPTSRRAAAAA
ASLTIASMVASENRDDRDGALILPQTPITPIAPAAVATPAPPKEKKAKGLFKPPSYPSTV
LRPRANVKAPTPSTAADSAHLPPPIENDLPAPSSSGIDRQGSKVMLTAKRAKELEREAKE
KEYADGQHANMIDGVWHCSNCGCPESIAVGRRKGPLGDKSQCGTCGKYWHRHRRPRPVTY
NSSLEYHMGLIRAEEQQKSSSKRKRPQSSVVEEAKSQVVDDEDMDTPAPAPPKSKAGKET
SAAPDGVLAELPETAVSPVSTASSGSEPPLSHRIKVNGAHSKSAPPGPPEPVVKQESTNA
TGVVSPPAASPPRLAPSAPPTQNP
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgcccatcgcgcctgcgcccgtccccgccggggcgcaggcgcccggctcgccgcacgta
ggcatgaagcgcaaggcgtcggagacccccgcgcccgcccggacgtcgacgcctgcgtct
gggaacattcccctcgcgggggcgggcacgcccgggccgcagatggcgcgcacgtacagt
gcgaccgggatcgcgggcatggggatcacgggcaacgtcggccccgcgcagcagcagggc
ctcagccagaactcttcggcgtcgtcgttgatgggcggggcgggaggcgggatgatgcct
cccccggtcctcccgcgccaggggcaagcgggcgacgggatgaacatcgggatgggcctg
cgctcgacgatgcccggccaggcgcagaacgtgaacgcgaacctcgtaccgggcgtcggc
gctggatctccgagtgcctccctgaatttgggcgggctggacggcgggagcgcggtcggg
cccgtcccgccgcagaccccgagacagaactcgttgcctcccgccgcggcgtcgccttac
cagcagatcggctcgccgggcgtgaatgtgcccgggatgattggcgggacgccgacgaag
ccggttgttgtgaagccgggcacgtcgcccgcgccgaccgtctcccccgcgcagcagcag
cagcagcagacggtgacggtgacgaagacgcagatcgtgccgcagctgccgccgctcccg
gcgacggtgcagctcgagcagaaggtgacgcaggtgtcggtcgtgccgctcgcggactcg
gagaaggcgatcccgccgctgagcgcggaggagatcgcgcgggtgcaggcgtggcagcag
gcggacagggactacgaggtgcggcgcaagaagatgctggaacgggtacaggaggagatg
aagaagacggtgagcgcgccgcgcgcgtggtgggagaaggacttcagtctggggggcgtc
ggggaggagcagctgaagcggcggaggggggacaagtggactctgacggggctgaaggcg
cagaaggagagggagatgaaggacaagaagcggatggggaagagggaggggctaaggctg
ccgaggaggatatcggacgaggacgcgcagcggccggagcagcttgtgcctatccggctc
gagttcgacgtcgagcatcacaagatgcgcgatacgttcgtgtggaacctcaatgatcca
atcatcactccggaggttttcgctcagtccgtcgtggatgactaccaactcaccccaagc
taccacgccatcatcaccaagtccatccaggagcaactcagcgactacaaggcgcattcg
gcgacattcggcgaagacggtgccatgattgacgaagcggaggacatcatgcacggcaag
ttttcagaagcggaggcggcgtggtgggaggcctggcggaagcgcgtccgttcgagagcg
ctgtacaagctgcctaatccgccagacccccgcactcgcaagcggagaaaggtcgttaag
gacgagacagtcgagcagccgactgcggcagtaccccctagtggcgacgtcccgatgacg
gtcgacgactttgaagaggacgagaatctgatgcatgaagaaatgcgtatcttggtcaag
ctggacatcatcgccggctcgtacaagcttgaagatcagttcgaatgggatctcgagaac
gtcgatccaacgcccgagcagtttgctgagatctactgcaaagatctcggcctcggtggc
gagttcaagacggcgatcgcgcactctatccgcgagcaagtgcagatctatcagaaatcg
ctattcctcgtgggccacccgtccgatggttctgcggtgcaagacgatgatcttcgcatg
tcgctcctgccttcgcttatctccggcgcccgctcgatggagcaagtcagtgcgttcacg
ccgcagctcaactatcttagtgagagcgagctggagaagaacgagaaggaccgcgagaag
gagctcgcacgtcgaaagaggaagacgactcgtggaaggcgtggcgtggcgctcccagac
cgcgagcctcccaagacttaccgcaccccggccattggcttccccgagatctcccctgcg
gctcttgctctcgctgccgcggctgcggcgccgacgtctcgtcgcgcggctgctgcggct
gcgtcgctcactatcgcgagcatggtcgcgtcggagaacagagacgacagagacggtgct
ctaatactcccgcagaccccaataacgcccatcgcacctgccgccgtcgccactcctgcg
cctcccaaggagaaaaaggccaagggtctcttcaagccgccctcatatccatccaccgtc
cttcgtcctcgcgcgaatgtcaaggctccaacgccgtcgactgccgcagactctgcacac
ctcccgccgccaatagaaaacgacctccctgctccgagtagtagtggcattgacaggcaa
gggtcgaaggtcatgctcactgccaagcgcgcgaaggagcttgagcgggaggccaaagag
aaggagtatgctgatgggcagcatgcgaacatgatcgacggggtgtggcactgctcgaac
tgtggttgccccgagagcatcgccgtcggacgtcgcaaaggtccgttgggtgataagtca
caatgtggaacgtgtggcaaatattggcacaggcatcgacggccacgacctgttacatac
aattcgagtttggagtaccacatgggcctcattcgcgcggaagagcagcagaagtcctct
tccaagcggaagcgtccgcagtccagtgtcgtcgaggaggccaagtctcaggtcgtagat
gatgaagacatggacacccctgctccagcgcccccaaagtcgaaggcgggcaaggaaacc
tccgccgctccagatggtgtgcttgccgagcttccagagacggctgtttctcctgtgtcg
acggcgtcgagtggatccgagccgcccctttcgcatcgtatcaaagtgaacggggcacac
tcgaagtcggctcctcctgggccgccagagccggtggtcaagcaggagtccactaatgcg
acaggcgttgtatcgcctccggcagcctcccctccccgccttgcgccctctgcgcctccc
actcaaaaccca

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