Dichomitus squalens: DICSQDRAFT_110165
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Entry
DICSQDRAFT_110165 CDS
T03133
Name
(RefSeq) NUC189-domain-containing protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
dsq
Dichomitus squalens
Pathway
dsq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DICSQDRAFT_110165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_110165
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DICSQDRAFT_110165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_IFT122_1st
WD40
Ccdc27
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
Beta-prop_RIG_2nd
UTP15_C
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
18833899
NCBI-ProteinID:
XP_007368809
JGI:
110165
UniProt:
R7SR71
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MAATLSKAKKSRTKPPRGRPQATSAISQPAVEDATTSTYLSSFSPDGHLFAFLSLAIDKH
ALKVYDTATRRSVAEHIVDAARVTSLCWARLDLAEGAGKGIEDEQSSRKSKRKKRNSLAA
DAAPSSNAAPQLVVLGLSDGSLLLFSPTHGRLLRTLSDPSSSSAVLAVAGQDTDSVDPHT
LWASSADGALRLWDARANKILHSLFSDDRIPYTSLSARSSEEESVTEVLAAHHSIHLLAV
AAESQKPKTLAKFTGHASPVSELRWLDKSHFLSSASVDRFVNVWEVPSAPKTDGKIVATI
PLDSDSRAINLSPPPLSDSTAGRLLFTVSAAGKISVFTVASDLATPSSAKGKSAIPTLAP
KSVISPSSRKNAAALSVLAVSSVDEAAGRLRIASVTGGVQLAFDAVDYRDQSGNFVPDVS
VTVATLEAAVGQADGQITGAPNKRYNESASLAVGIGAEIGQDRELDDLVSRDVDGALDAD
LAELSLGQRLTAVQGVAARGSDSEFDSDGEGSAPAPNGKSKVAPVDAVPASSLTRTLIQA
LHSSDTRLLETCLAHSDATLIRNTVRRLPPQLAVPLVTACVERLGRGARGNALKGGGGGA
SSQRGTALINWVKAVLTTHSGHLMTMPDLVARLSGLHATLTQRLTLQESLLSLSGRLDMV
MSQIEMRSSGPPAPLPMPKNKSRNKPNRVRESRRYVEGESEVEAEEQMEVEVESADDEGS
IEDVELGGSEDESIEGSDEEAEEDEDDDEDEEGDDPTLGGFIDDEAEETDEEEDEDESE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaccctatcaaaagcgaaaaagtcgcgcacaaaaccgcctcgcggacggccc
caggcaacatccgccatctctcaacccgcggtcgaggacgccacaacctcgacctacctc
tcctccttctcccctgatggccacctcttcgcctttctttctctagcaatagacaaacat
gcgcttaaagtctatgacacggcgacacgccgttctgtcgccgaacacatcgtggatgcc
gcgcgcgttacctctctatgctgggctaggctagatctcgcggagggagcagggaagggt
atagaggacgagcagagctcaagaaagagtaaacggaagaagaggaacagtcttgcggcg
gatgctgcgccctccagtaatgctgcgcctcagcttgttgtccttggtctttctgacggc
tcgctcctgctcttttcgcctacccacggcagactactccgcacgctatctgacccttcg
agttcgtctgctgtcctggcagttgctggccaagacaccgattccgttgacccacacact
ctttgggcgtcgagcgcggatggcgctcttcgattatgggacgcgcgggcgaacaagata
ttgcactcgcttttcagcgacgatcgaataccatacacttccctctcagctcgctcatct
gaagaggagagcgtaacagaggtgttggcggcacatcactcaatacacctcctcgccgtc
gccgctgagtcccaaaagccgaagaccctcgccaagtttacgggccatgcgtctccagtg
agcgagttgcggtggctagacaagtcgcatttcctctcttctgcatctgtcgaccgtttc
gtgaacgtttgggaagttccatctgcaccgaagacggatggcaagatcgtggctactatc
cctctcgactccgactcccgcgccatcaacctctcaccgcctcctttgtcagactctacc
gcagggcggcttctcttcaccgtgtccgctgccggcaagatttccgtcttcaccgtggcc
tccgaccttgcaactcccagctctgcgaaaggcaagagcgcgatacctacccttgccccc
aagtcagttatctccccttcatccaggaagaacgcggctgccctatctgtccttgccgta
tcatccgttgatgaggctgccggtcgcctcaggatcgccagcgtgacgggtggtgtgcag
ctggcgtttgacgcagtggactaccgagatcaatctgggaacttcgtccctgacgtctct
gtcaccgttgccacattagaagccgccgtcggacaagcggatgggcagattacgggcgca
ccgaacaagcgatacaacgagtcggcatctcttgctgtcggaatcggagccgagattggg
caggatcgggagcttgacgacctcgtcagtcgagacgtcgacggtgccctcgatgctgac
ctcgccgaacttagtctcggccagcgtctgaccgcggtgcagggtgtggccgctcgcggg
tctgactccgaatttgactctgacggtgaaggtagtgcccccgctccgaacggcaagtcc
aaggtggcaccggtggacgcggtgcccgcaagctcccttacgcggacgctcatacaggcg
ttgcactcgtctgacacgcggctgctggagacgtgtctcgctcactcggacgcgacgctc
attaggaatactgtccggaggctcccgcctcagctggcggtaccgcttgtcactgcttgt
gtggagcggttaggtaggggcgcgcgaggcaatgcgttgaagggcggagggggaggcgca
agctcgcaacgtgggactgctctgatcaactgggtgaaggcggtcttgaccacccatagt
ggtcacctcatgaccatgccagatcttgtcgctcgcctctccggcttgcatgcaacgctg
acacaacggctcacgctgcaagaaagcctcttgtcgctcagcggccgcctcgacatggtc
atgtcccagatcgagatgcgttcctccggcccgcctgcaccgctgcctatgccgaagaat
aagagccgcaacaagcccaaccgggtgcgagagtcccgccgctatgtcgagggcgagagt
gaggttgaggcagaagagcaaatggaggtcgaggtcgagagcgccgatgacgaaggaagc
atcgaggacgtagagttgggcggcagcgaggatgagtctatcgaggggtcggacgaggag
gctgaggaggatgaggacgacgatgaagatgaggagggagacgaccccacccttggcggg
ttcatcgatgacgaggcggaggagactgacgaagaggaggatgaggatgagagtgaatga
DBGET
integrated database retrieval system