Dichomitus squalens: DICSQDRAFT_112614
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Entry
DICSQDRAFT_112614 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
dsq
Dichomitus squalens
Pathway
dsq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DICSQDRAFT_112614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_112614
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
DICSQDRAFT_112614
Prokaryotic type
Archaeal type
TFE
DICSQDRAFT_112614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
wHTH-PRTase_assc
Zn_Ribbon_TF
A24_N_bact
Motif
Other DBs
NCBI-GeneID:
18834050
NCBI-ProteinID:
XP_007370490
JGI:
112614
UniProt:
R7SM49
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MAQGLSKDEQETLRLLVQHVSRAFYEPKFTVVLDQLIRHPVLKDDELAGRMGLQLKELNK
IMATLEGHKLVRIYRQNELKEGAQRSVGRQYFYIDYQSFCNVVKWRMAEMRRIIDQGLRN
ELDSKGYLCPQCRKTFQTLEVDRLFNPALGTFNCDVCGAEVVDNENAENVVGSQDRMQRF
NRQMRFILEGLRRTEEMVLPAFDVALWIRNHLEAERAKAAAREGGLKIAGASGEGRQGDT
IGVVISVDKDEEAARAERDREAAAKRQQNALPKWHLQSTISGELTALGVKETARAAAASV
ADGNKLPSSNDAILRGLGAPKIATPSTNGGDTKPAIIQADEADYYDQYYASLAASADPST
RPTPGKSDFGDEEEDVKPNVEYLESLNEYRKRSRSRDDVGTGASTPKLPRTDSLIGTYEV
AVAAVNGVGEEEFGQAPVNGATAEDPIVYVNGKPVALSKVTEEHQEEMTPEEYTAYYELL
SAQS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaggtctgtccaaagatgagcaagagactctccgtttgctagtacagcatgtc
tctcgggccttctacgaacccaagtttactgtggtcctggaccagctcatccgccatcca
gttctgaaggacgacgaactggcggggcggatggggctccagcttaaggagctcaacaaa
attatggctacgctcgagggacataagcttgtccgaatataccggcagaacgagctgaag
gagggcgcacagcgctcggtcggtcggcagtacttttacatcgactaccagtcgttctgc
aacgtcgtcaagtggcgcatggccgagatgcggcggatcatcgaccagggcctgcggaac
gagctcgactcgaaagggtacctctgtccgcagtgccgcaagacgttccagacgctggag
gtcgaccgcctgttcaaccccgcgctaggcacgttcaactgcgacgtgtgtggggcggag
gtagtggataacgagaacgcggagaacgtcgtggggagccaggatcgcatgcagaggttc
aatcggcagatgcggttcattttggaggggctgaggaggacggaggagatggtgctccct
gcgttcgatgtcgcgttgtggatacgcaatcatctggaggcggagcgcgcgaaagccgcc
gcgcgagaaggcggactgaagattgcgggtgcatcgggagagggcagacagggcgacacg
atcggcgtcgtcatctccgtcgacaaggacgaggaagccgcgcgtgccgagcgcgaccgt
gaagccgccgcgaagaggcagcagaacgccctgccgaagtggcatctgcagagtactatc
tctggcgagctcaccgcgctcggtgtcaaggaaactgcgcgcgccgcggcggcttctgta
gcggacgggaacaagctgccgagttcgaacgacgcaatattgaggggtttgggggcgcca
aagattgctacaccatctacgaatggtggcgacacgaagcctgctatcatacaagccgat
gaagcagattattatgaccaatactatgcgtctcttgccgcgtctgccgacccgtcgact
aggcctacgcccggcaagagcgacttcggggatgaagaggaggacgtgaagcctaacgtc
gagtacctcgagtccctcaacgagtaccggaaacgctcgcgctcgcgcgacgacgtcggc
acgggcgccagcacacccaagctaccgcggacggacagtctcatagggacgtatgaggtt
gcagtggcggcagtgaatggtgtcggtgaggaggagtttggacaagcccctgtgaatggt
gccacagcggaggatcctatcgtctatgtgaatggcaagcctgtggcgctgtccaaggtt
accgaggaacaccaggaggagatgacgccggaagagtacacagcatactacgagctgctg
agtgcacagtcatag
DBGET
integrated database retrieval system