Dichomitus squalens: DICSQDRAFT_112857
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Entry
DICSQDRAFT_112857 CDS
T03133
Name
(RefSeq) RNA-binding protein Prp24
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_112857
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_112857
Spliceosome [BR:
dsq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
DICSQDRAFT_112857
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
DICSQDRAFT_112857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
HAT_Syf1_CNRKL1_N
RRM_7
HAT_PRP39_N
HAT_PRP39_C
RRM_10
RRM_11
RRM_Nup35
RRM_3
UTP6_C
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
18834061
NCBI-ProteinID:
XP_007370630
JGI:
112857
UniProt:
R7SLI0
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MDVDMNEADSLEALSAILERLTENPYDISLHAEHIRIAHATGMDGQAGSALEMVTAFWAA
GDYVWLPLIEHKIAGSNLETPEDLQSILDLFSRAEQDYLSIPILQKHLDFLVERHEHFVE
AGGRPDALGEMFSPEWMHDSISKVVAQGAEHLTKSHLLFDAQRDWELERLSNATGEEREV
LIGVVEQLLLERLKQPHSNHEETFQTYSSFTTNYKPADQYESLLVHASKSKAQAVKGFQR
RENYENSLVKANYSLEGYAYYIASEKRNKKPDLFVLKGLYERAIAEADKRRFSGEANAEN
LLRSFWIGYVDLLRTQAVEEDELLLVFQRGLRSVPTSGEFLARYIRYLERVLEFEEAARE
INAVYERGRTIGPLQADVEQLIPSVLARAGFEKRQIEAGKTDHDSLLQILLDAISRAHKA
SSAGDPRLRLEKYFSAVCLDTEELAGNALVMWEDATRFYKTSYLVWTAYTEALTKGRMYD
DARKVFRDVANKNLDWPEAVWEAWIAFEHLHGTVEQIEDALDRVERAQVQVNNRRAKEAQ
KAQEAAAQLIAETQAATEAALPVQAETAPTLAAMEVDSGAPAEASAKRKAEDEGTPEPTK
KARLEEQAKLKRDRENCTVFVAEMPAGVTEDELRTLFKDCGSIREIKITQLPNSLVATVE
FMDRESVPAALTKDKKRIRGQEVAVHLAWKSTLYVTNFPEKADDKFIRTLFGKYGEIFDV
RWPSKKFKSTRRFCYVQFTSPTAAEHALELNGTELEESHKMSVFISNPERRKERTDSDAD
DREVYVAGLSKLVTKEDLENLFKTYGTVKDVRMILDDKGRSKGFAFVEFETENDARAALA
ANNHELKQRRMAVTLADSRVRAKNKAPGYRAEVRNRSVRVRNLPPNTQEGLLQQALEKHA
RVKRVEVFQDLNEADVELEDAAEAGKLLLRPDSIVFDGNTLQIVAESTTGPRTARPLAPP
AANTGLFVPRAAVSRPRAGLGSKQRGLGTGQVSRSAADPGSSASTPSPANGGASKGQDDF
RRMLSGGK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacatgaacgaggccgactcccttgaggctctctcggccattcttgaacgc
cttaccgagaacccctacgacatctcccttcatgccgaacacattcgcatcgctcacgca
acaggcatggacggccaggccggctctgcactagagatggtgacagcgttttgggctgct
ggggactatgtttggctccctctcatcgagcacaagatagccgggagcaatttggagacc
ccagaggacttacagagcatcctcgacttgttctcgcgcgccgagcaagactacctgtcc
atccctatactccagaagcatcttgacttcctcgtagagcgacatgaacatttcgtggag
gccggcgggagacctgacgctctcggggaaatgttctctccggaatggatgcatgattct
atctccaaagtcgtggctcaaggagctgagcatttgaccaagagccatctcctttttgac
gcgcaacgagactgggaacttgaacgcctctcaaacgcgacgggagaagagcgggaagtg
ctcataggtgttgttgagcagttgctgctggagcgtctcaagcagcctcattcaaatcac
gaagagacattccaaacatactcctcattcaccaccaactacaaacccgcagaccagtat
gagtccctgttagtgcacgcgtccaagtcaaaagctcaggccgtcaagggattccaacgt
cgtgaaaactatgagaactcgcttgtcaaagcgaactactctctcgagggttacgcgtac
tacatcgcctcagagaagcgtaacaagaagcccgatctctttgtcctgaaagggctttac
gaacgagccattgctgaagccgacaagcgaaggttttcaggcgaagccaacgcggagaat
ctactacgttcgttctggatcggttacgttgacctcctacgaacccaagctgttgaggaa
gacgagctgcttctcgtcttccagaggggcctcagaagtgtgccaacgtctggcgaattt
cttgcgcggtacattcgctacttggaacgcgtcttagaattcgaggaagctgccagagag
atcaacgcggtttacgagagaggtcggacgataggtcctctccaagccgacgtcgagcag
ctcatcccgagcgtcctggctcgcgctggcttcgaaaagcgccagatcgaagcagggaag
accgaccatgattccctgctacagatccttcttgatgctatatcgagggcccacaaggcg
tcatccgccggcgaccccaggcttaggttggagaagtacttctctgctgtatgcctggat
accgaagaattagccgggaacgcgctcgtcatgtgggaggatgctacccggttctataag
acaagctatttggtgtggactgcttacaccgaagccctgacaaaggggcgcatgtacgat
gacgcacgcaaggtcttccgggacgtcgccaataagaacctcgactggcccgaggccgtt
tgggaagcgtggatcgccttcgagcacctgcacggtaccgtcgagcagatcgaggacgcc
ctcgaccgcgtcgaacgcgcgcaggtgcaggtcaacaatagacgtgctaaggaggcgcag
aaggcacaggaggcggccgcccagttgattgcggagacccaggccgcgacggaggcagcg
ctacccgtgcaggcagagacagcacccacgcttgctgctatggaggttgattcgggggcg
cctgcggaggcttcagcaaagaggaaggcagaggacgaaggcactccggagcctaccaag
aaagctagacttgaggaacaagcgaagctgaagagagatcgtgaaaattgcacggtgttt
gtcgccgaaatgcccgctggcgtcacggaggatgaattgaggacattattcaaggattgc
ggcagcatccgtgagatcaaaattacacagctaccgaactctctcgttgccactgttgag
ttcatggaccgagagagcgtccctgcggcgctcacaaaggacaagaagcgaatccgcggc
caggaggtggctgttcaccttgcgtggaagtcaacgctgtacgtcacgaacttcccagag
aaggcggacgataagttcattaggacgttgttcggaaagtatggcgagatcttcgacgtg
cggtggccgagcaagaagttcaagagcacgcggcggttctgctatgtccaattcacttcc
cctactgccgctgagcatgctttggagctgaacggcacggaactcgaggaaagccataaa
atgtctgtgtttatctctaatcctgagcgaaggaaagagcgcacagacagtgatgcggac
gaccgtgaggtctacgtcgcgggcctcagcaaacttgtgacgaaggaagatctcgagaac
ctattcaagacgtatggtaccgtcaaggatgtgcgcatgatcttggacgacaaaggtcgc
tcaaagggtttcgcattcgtcgagtttgagaccgagaacgatgcgcgtgccgcccttgct
gccaataaccacgaactcaagcagcgtcgtatggctgttactctggcggacagccgcgtg
cgcgcgaagaacaaagctcccggatatcgtgcggaagtgcggaatcgatccgtacgggtt
cgcaacctcccgcccaacacgcaggagggcttgttgcagcaagcgcttgagaagcatgcg
cgagtcaagcgagtggaggtgttccaagatctcaacgaggcagatgttgagcttgaggat
gctgcggaagcaggcaagttactgctccgaccagattcgatcgtctttgatggcaacact
ctgcaaattgtggcggagagtacgacagggccgcgcactgctcgtccgctggcgccgcct
gcagcaaacactgggctctttgtgcctcgcgctgctgtgtctcgaccgcgtgcgggacta
ggaagcaaacaacgtggtctaggaacgggacaggtgtctcgctctgccgccgacccgggc
tcgagtgcatcgacaccttcacctgcaaatggaggggcgagcaagggccaggatgacttc
cgaaggatgctttcaggagggaagtga
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integrated database retrieval system
