Dichomitus squalens: DICSQDRAFT_113305
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Entry
DICSQDRAFT_113305 CDS
T03133
Name
(RefSeq) DEAD-domain-containing protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_113305
Enzymes [BR:
dsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICSQDRAFT_113305
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-60S particles
Helicases
DICSQDRAFT_113305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18834098
NCBI-ProteinID:
XP_007371018
JGI:
113305
UniProt:
R7SJC2
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MTARAAGIKRKTKPSASSLAKRVKTKHVLTDDLPWKKVSKPREADLGTGMDGFLDLEEVQ
DVDVVFEETEAGRVVKFKVRGEDDEGEDVLDAHVSEGEEVAGQSSAVTTENIDLDALPEP
IKFDTKSLLPEWHSFKLHPQLARALYAKKFTTPTPIQAQTLPLALKNKDVVGVAETGSGK
TLAYGLPILHYLLTEAYSRPIPSNKTRRPVRALVLAPTRELALQVSSHLNACLSSMDVDA
VENKTGDDEVSKKGKNKGKAKAKAKAAETPALENKPKHPPLVSVAAVVGGMSAQKQRRII
SRGVDVLVATPGRLWDILQEDDELATQIEFLRFLVLDEADRMIETGHFAELDNILRLTLR
KSDDDVIEPENKMDEEEDTKDGVRGGDLQTFVFSATLSKDLQQNLKRRARPKARRKADKP
ASTLDDLLLRLDFRDPSPAVVDIAPASRVPAALTESRVDCLAADKDAYLYYFLLRYPGRT
LVFLSAIDGIRRLLPLLALLGVPAFQLHSQLEQRQRLKNLDRFASTRNAVLLATDVAARG
LDITGVDHVVHYQAPRTADAYVHRNGRTARAMRRGFALLMCAPDERRVVRALMRGLGREE
EELAEMPVELYMLDKLKARVQLAREIDRLQHKAKKERHERSWLKEAAEAMEIELDSDLAS
DSDEDKAPSKQKQKAAGAKAAALKAQLKAMLTQPLVARGVSTRYITSGVRSIADDLLAGE
YHETMVGMKKVEAGSDLVPAKARKAKKRATKAEEEEFEEWGGISVGAGGSDDT
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgactgccagggctgcaggaatcaagagaaagacgaagccgtcggcctcgtcgctagca
aaacgtgttaagacgaagcatgtcctcacagacgacctgccgtggaaaaaggtctctaag
ccgcgcgaggcagaccttgggacggggatggatgggttcctcgatttagaggaggttcag
gatgtggatgttgtatttgaggagacggaggctggtcgggttgtgaagttcaaggtgcgc
ggcgaagatgatgaaggggaagatgtgctggacgcgcacgtcagcgaaggagaggaggtc
gcgggacagtcgtctgcagtgaccacggagaacatcgacctcgacgctctgcccgagccg
atcaagttcgacaccaagtcccttctccccgaatggcactcgttcaaactccatcctcaa
ctcgcacgcgcgctgtatgcgaagaagttcacaacaccgacgcccatccaagcgcagaca
ctcccgctcgccctgaagaataaggacgtagtcggtgtggcagaaactggctctggaaag
acgctggcgtacggcctgcccatcctccattacctccttacggaggcatactcgcgccct
atcccgagcaacaaaacgaggcgacccgtccgcgcgctcgtcctcgctccgacgcgtgaa
ctcgcgctccaagtctcttcgcatctcaacgcatgcctctcgtcgatggatgtcgatgcg
gtcgagaacaagacaggtgacgatgaggtgtcaaagaagggcaagaacaaggggaaagcc
aaggccaaggccaaagctgccgaaacccccgctcttgagaacaagccaaaacaccctccg
ctcgtaagcgtggctgcggtggttggaggcatgtccgctcagaagcagcgccggatcatc
tcgcgcggcgtggacgtgctcgtcgcgacgcccggtcgtctgtgggatatcttgcaggag
gacgatgaactagcgactcaaatagaattcctgcggttcctcgtgcttgacgaagccgac
cggatgatcgagaccggccactttgctgagctggacaacattctgcgtttgacattgcgg
aaatcagacgacgacgtcattgagcccgagaacaagatggacgaagaagaggacaccaaa
gacggcgtccgcgggggcgacctccaaaccttcgtcttctccgccacgctctctaaggac
ctccaacagaatctcaaacggcgggcgcgccccaaagcccgccgcaaggccgacaagcca
gcatcgacgctcgacgacctcctcctccggctcgatttccgtgacccgtctccggccgtg
gtcgacatcgccccggcgtcccgcgtcccggcagccctgactgagagccgcgtggactgc
ctcgcagcggacaaggacgcgtacctgtactacttcctcctccgctaccccggccgcacg
cttgtcttcctgtccgcgatcgacggcatccgccggctgctcccgctccttgcgctgctc
ggcgtccccgcgttccagctgcactcacagctcgaacagcgccagcgcctgaagaacctc
gaccggttcgcgagcacgcggaacgcggtgctgctcgcgacggacgtcgccgcgcgcggg
ctggacatcaccggggtggaccatgtcgtgcactaccaggcgccgcgcaccgcggacgcg
tacgtgcaccggaacggacggacggcacgggcgatgaggagggggttcgcgctgctgatg
tgcgcgccggacgagaggcgcgtcgtgcgcgcgctgatgcgcggtcttggacgggaggag
gaggagctcgcagagatgccggtggagctgtacatgctcgacaagctcaaggcgcgcgtg
cagctcgcgcgcgagatcgacaggctgcagcacaaggcgaagaaggagcggcacgagcgc
agctggctcaaggaggccgcggaggcgatggagatcgagctcgactccgatctcgcgagc
gactccgacgaggacaaggcgccgtcaaagcagaagcaaaaggccgcgggagcgaaggcg
gcggcgctcaaggcgcaactgaaagcgatgctgacgcagccgctcgtcgcgcgcggggta
tcgacgcgatacatcacgtcgggcgtgcgctcgatcgcggacgacctgctcgccggtgaa
taccacgaaacgatggtggggatgaagaaggtcgaagcgggctccgacttggtgcccgcc
aaggcgcgcaaggcgaagaagcgcgccaccaaggcagaagaggaagaattcgaggaatgg
ggagggattagcgttggtgccggtgggagcgacgatacgtag
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