Dichomitus squalens: DICSQDRAFT_113888
Help
Entry
DICSQDRAFT_113888 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
dsq
Dichomitus squalens
Pathway
dsq03015
mRNA surveillance pathway
dsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DICSQDRAFT_113888
09123 Folding, sorting and degradation
03018 RNA degradation
DICSQDRAFT_113888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_113888
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_113888
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
DICSQDRAFT_113888
mRNA cycle factors
Stress granule specific factors
DICSQDRAFT_113888
Spliceosome [BR:
dsq03041
]
Complex C
Other components
Complex C specific factors
DICSQDRAFT_113888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
PAM2
Nup35_RRM_2
YqzE
Motif
Other DBs
NCBI-GeneID:
18834130
NCBI-ProteinID:
XP_007371460
JGI:
113888
UniProt:
R7SJB7
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MASEYSSPPPEPRHQPHPYLHEPLLYISNLPAFVRDEDLAVTFQTCAPFRPNIQRDGSNR
PLSGTIEFKYLEKAEKALATLQGRPIPNLPQNVPLVLSPYPSTTPPTPLPPPNASPRLVK
QLPLGYTDSQLYDLFRPFGALASVRTQAPFGKDTGVVEFWREEDAREAEDTMHCAEVEGQ
NIVVQVYQPRRAGAIASEFSPNAPSFIPTGSVFPYPAQYSPPRQSPYGGPRQQQPLFIHG
PGQQVQLAPLSGPGSTSHSGLIDPCNLFIKNLDTSIDSNGLFSHFRQFGQIVSARVMRNE
QGESRGFGFVSYQTPDQAAAAMNAMNGVTLGTKQLVVRLHEPKQLRQEKLAQRFGGHNGH
PRSSSGATSPTASEAGESYAGWPSPSSHPAVLGSPVMGHHDRPDNRARRSSGSFYHAALA
GTLNLPMRYDDLSALSPVVRKEVLSGELQRQIKGMDAVSSDELESVVQAIVGLSLSEVVQ
GIQDPAKLSEQVQAAKKSLNLSKGSSPAPPSPSPAASQDSRLLDIGPNATASAPDHPSTP
LSMPATLSTPPRTESPSGSLTTPQSERDRMFAAVSKLESSQVSDLTDLLMSLPKRERAMC
LFNVEVLRAKIADAKLVLEVDETEEQTPAVQTVPVPQTPQQRKVSAASFDSPHTPDLSSR
GPSAAASPTPATPSSQVHTIASLARLPASEIIKLVQSSSVTGLPLPKADPMVVKATDEFI
DSLQDKPINQQKQQLGDKLCAMSFLWYVCFANCVCRWRVVKAFGIKGAPKITIALLDQDD
LRPLAHLMNSYPSVLKEKALLVQAAQSK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggagtacagcagcccgcccccagaacctcgtcaccaaccccatccatatctc
cacgagcctttgctgtacatctccaacctcccggcgttcgtgagagacgaagatcttgcc
gtcacgttccagacatgcgcgccgttccggccgaacatacaacgagatgggtccaacaga
ccgttgtcggggacgatcgagttcaagtatctggagaaggcggagaaggcacttgcgacg
ctgcagggccgcccgatccccaatctaccccagaacgttcctcttgttctctctccgtat
ccttccaccacaccacccacacctcttcctccccctaatgcctctccacgacttgtgaag
caacttcctctaggatacactgactcacaactttacgaccttttccgtccgtttggagct
ctcgcctcggtgcgcacgcaagccccgtttggcaaagacaccggcgtggtcgagttctgg
agagaggaagacgctcgggaggcggaagacacgatgcattgtgccgaggtcgagggccag
aatatcgtcgtgcaagtatatcaaccccgccgtgctggggcgatcgcgagcgagttttct
ccgaacgctccgtcgttcatcccgaccggctctgtatttccataccccgctcagtattcc
ccgcctcggcaatcaccctatggtggaccgcgtcaacaacaacctctgtttatccatggc
cctggacagcaagtgcagttggccccgctctctggtcccggatccaccagccactctggg
ctcattgacccttgcaatctgttcatcaaaaacctcgacacctcgattgactccaacggg
cttttctcgcacttccgtcagtttggacaaattgtcagcgcccgtgtgatgcgtaatgag
caaggagagagccgtgggttcgggttcgtatcttaccagacccctgaccaagctgctgcg
gctatgaacgcgatgaacggcgtcacactcggtacgaaacagcttgtggtccgcctgcac
gagccgaagcagctccggcaagagaagctcgctcagcgtttcggcggccacaacgggcat
cctcggagcagcagcggtgcgacatctccgacggcaagcgaggcgggcgagagctacgct
gggtggcctagccccagcagccatcctgctgtccttgggtcacccgtcatgggacatcat
gatcggccagataaccgggctcgccgcagctctggtagcttttatcacgctgcactcgcc
ggcacgctcaatctgcctatgcgctatgacgacctctctgcgctatctccggtcgtccgg
aaagaggtgctctctggcgagctccagcggcagatcaagggcatggatgccgtttccagc
gacgagctcgagtcggtcgtgcaggctatcgtggggctgtcgctgagcgaggtcgtacag
ggcatccaggaccctgcgaagctgtccgagcaggtgcaggcggcgaagaagtcgctgaac
ctgtcgaaggggtcgtcgccagcgcctccttctccgtcccccgctgcctcccaggactca
cgcctcctcgatattggtccgaacgcgactgcctccgcgcccgatcatccctctacgccc
ctctccatgcctgcgacgctttccacacccccgaggaccgagtctccgtctggatcgctc
acgacgccccagtctgagcgcgatcgcatgtttgctgccgtctcgaagctcgagtcctcc
caagtctcagatctcaccgacctcctcatgtcgctgcccaagcgcgagcgcgccatgtgc
ctgttcaacgtagaggtgctccgcgccaagatcgcggacgcgaagctcgtcctagaagtt
gacgagaccgaggaacagacgcctgccgtacagaccgtccccgtcccgcagaccccgcag
cagcgcaaggtgtcggctgcgtcgttcgactcgcctcacaccccagatctgtcatctcgt
gggcctagcgcggcagcgagcccgacacccgcgactccgagctcgcaggtgcacacgatc
gcgtcgctagcgcgcctgccggcgtccgagatcatcaagctcgtgcaatcgtcgtcggtg
acgggcttgccgctgcccaaggcggacccgatggttgtgaaggcgacggacgaattcatc
gatagtttgcaggacaagccgatcaaccagcaaaagcaacagctgggtgataagctgtgc
gccatgtccttcttgtggtacgtatgttttgctaactgcgtatgtaggtggcgtgttgtc
aaggcctttggtatcaagggtgcgcccaaaatcacaatcgctctgttggatcaggacgac
cttcgtccgcttgcgcacctgatgaacagttacccgtcggtgcttaaggaaaaggctctc
cttgttcaagccgctcagtccaagtaa
DBGET
integrated database retrieval system