Dichomitus squalens: DICSQDRAFT_124073
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Entry
DICSQDRAFT_124073 CDS
T03133
Name
(RefSeq) NOL1/NOP2/sun family RNA met
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_124073
Enzymes [BR:
dsq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
DICSQDRAFT_124073
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
DICSQDRAFT_124073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
TRM5-TYW2_MTfase
PCMT
Methyltransf_25
DUF938
FtsJ
Ubie_methyltran
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
18834214
NCBI-ProteinID:
XP_007361247
JGI:
124073
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MGRRAKNKQGDPSPLAEVKENAGRPSQKKLGKRKADDVDSANKRPAKKVKEGEARTDKPS
KPTAAKGRATTASKNEGKARPVKSKSKKPSFEDDAEGAGGSEGWEDVEDDGDLQQHAKTL
FHEDDEDEFVGFEGDLNDLDLDGADEDDDLLRGPAQELDLGSDDEEEDELPVKLKSKKSK
QADRPLKIIPTMSDASSGESDEEEEDEDGPITMKNIEARSRALDARAAREAELDLEELQQ
AELAGEEDGDDFADADMDEEGEGGEDSEAFVLPTAEEREEEKKRGGPDVHTVQRRMRECV
RVLGNFNKLAAKGRSRSEYVQQLISDIASYYGYNDFLAEKLFQLFPVAEAIEFFEANEVP
RPVTIRTNTLRTRRRDLAQALINRGVNLEPIGKWTNVGLQVFESSVPIGATPEYLAGHYM
LQAASSFLPVIALSPQPGERVLDMASAPGGKTTHMAALMQNTGVVFANDANKARVKSLTA
NVHRLGCKNVVVCSYDGREFPKVIGGFDRVLLDAPCSGTGVISKDASVKTNKSERDFALL
SHLQKQLILCAIDSVAPDSKTGGYLVYSTCSVTVDENEAVVDYALRKRPNVKLVDTGLEF
GRPGYTSYRGKTFSDKLSLTRRFYPHVHNMDGFYVAKFKVEKRAKVKGEKDEAAGGTKGV
DADVDMGDASPAFDDAEDQQYIEGELSLYILCPFASCAHERRETTRQGFVVMLVDLGY
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggaagacgcgcaaagaacaagcagggagatccctcacctttggctgaagtcaaggaa
aatgctggacgaccatcccagaagaagctcggcaagcggaaagcggacgatgtcgattct
gcgaacaaacggcctgcaaaaaaggtgaaggaaggcgaggctagaacggacaagccctcg
aagcccactgcggcgaagggcagggcgacgaccgcttccaagaacgagggcaaggcaaga
cccgtcaaatccaagtcgaagaagcctagtttcgaggacgatgctgagggtgcaggaggc
agcgagggctgggaggacgtcgaggacgatggggacttacagcaacatgcgaagacatta
ttccatgaggacgatgaagatgaatttgttggcttcgaaggagacctgaacgacctagat
ttggatggcgcggacgaggacgatgacctattgagaggtcccgcccaagagctcgacctc
ggctcggacgatgaagaagaggatgagctccccgtaaagctcaagagcaaaaagtcaaaa
caagctgaccgcccactcaagatcataccgaccatgtcggacgcgtcttcaggcgagagt
gacgaggaggaagaggacgaggacggccccatcaccatgaagaatatcgaggcccgctca
cgtgctttggacgcgagagctgcccgtgaggcagagctcgatctggaagagttgcagcag
gccgagcttgcaggagaggaggacggggacgatttcgcggacgcggatatggacgaggaa
ggtgagggcggggaggacagcgaggcctttgtcctgccaacggcggaggagagggaggaa
gagaagaagagaggcggcccagacgtgcacacggttcagagacgaatgcgcgagtgtgta
agggtactaggcaacttcaacaagcttgcggctaaaggaaggtcgagatcggagtacgtc
cagcagctcatctcggacattgcaagctattacggctataatgacttcctcgccgagaaa
ttgttccaactcttccccgttgcagaggcaattgagttcttcgaggcgaacgaggtaccc
cgacccgtaacaatccggacgaacaccctccggacacggagacgcgacctcgcacaagcg
ctgatcaaccgcggcgtgaacttggagcccatcggcaaatggacgaacgttggcctgcag
gtgttcgagtcgagcgtaccgatcggcgcgacgcccgagtatctcgccggccactacatg
ctgcaagccgcctcgtcgttcctgccggtgatcgcgctgtctccccaacctggcgagcgc
gtgctggacatggcgtccgccccgggcggcaagacgacgcatatggcggcgctcatgcaa
aacacgggcgtcgttttcgccaacgacgcgaacaaggcgcgcgtgaagagtctgacggcg
aacgtccaccggctgggctgcaagaacgtcgtggtgtgctcctacgacggccgtgagttc
ccgaaggtcatcggagggttcgacagggtcctgctcgatgccccttgcagcgggacaggt
gtcatttccaaggacgcgagcgtcaagaccaacaagtccgaacgtgactttgcgctcctc
tcgcacctccaaaaacagctcatactctgcgccatcgacagcgtcgcaccagactccaag
actggcgggtacctcgtctactcgacctgttcggtgacggtcgatgagaacgaggcggtg
gtggactacgcgctccgaaaacgtcccaacgtgaagcttgtcgacactgggctcgagttc
ggccgtcccggatacaccagctaccgcgggaagacgttcagcgataagctgagcctcacg
cgtcgcttctatccccatgtgcacaacatggacgggttctacgtcgcaaagttcaaagtc
gagaagcgcgccaaggttaagggcgagaaggacgaagccgccggcggcacgaagggtgtc
gatgctgatgtcgatatgggtgacgcatcgcccgcattcgacgatgcggaggaccagcag
tatatcgaaggtgagctcagcctctatatcttatgccccttcgcttcctgcgcgcacgag
cgtcgagagacgaccaggcagggctttgttgtgatgctcgtcgatcttggatactga
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integrated database retrieval system
