Dichomitus squalens: DICSQDRAFT_125356
Help
Entry
DICSQDRAFT_125356 CDS
T03133
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
dsq
Dichomitus squalens
Pathway
dsq00100
Steroid biosynthesis
dsq00909
Sesquiterpenoid and triterpenoid biosynthesis
dsq01100
Metabolic pathways
dsq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
DICSQDRAFT_125356
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
DICSQDRAFT_125356
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dsq01006
]
DICSQDRAFT_125356
Enzymes [BR:
dsq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
DICSQDRAFT_125356
Prenyltransferases [BR:
dsq01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DICSQDRAFT_125356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF3910
Motif
Other DBs
NCBI-GeneID:
18834291
NCBI-ProteinID:
XP_007363199
JGI:
125356
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSRNTASSMLALLLTHPFEFRVLLQYKLWHEPKRDISQPSEHATSGWDRPTMRRCWHFLD
LTSRSFSGVIKEVEGDLARVICLFYLVLRGLDTIEDDMTIPDEKKQPLLRQFHKLAVKPD
WTFDECGPNEKDRQLLVEWTVVSEELNRLDPRYREIILDVTEKMQYGMADYAHKAAATDE
LYIETVDEYNLYCHYVAGLVGEGLTRFWAASGKEAAWLGDQLELTNAMGLLLQKTNIIRD
FREDAEERRFFWPREVWGAALYGKAVGRAGGFADITELYTPGNEKQALWVLSGMVVDVLG
HATDALDYLRLLTKQSIFCFCAIPQTMAMATLSLCFMNYDMFQRHIKIRKAEAASLIMKS
TNPRDVAYIFRDYARRIHARALPDDPSFLRLSVACGRIEQWCERHYPSFVRLQQVSGGVQ
YDPRDVRTRVVQAAEARDQALAKEKRMLEYRERAAAANGKGANGLLEDRKPAQEELSTVA
LLLYVAGGFLVVLAITLGFAWVLLTYFQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcaacacggcatcgtccatgctcgccctgctcctcacccaccccttcgagttc
cgcgttctcctccaatacaagctctggcacgagcccaaacgcgacatcagccagccctcc
gagcatgccacctcaggatgggaccgcccaaccatgcgccgctgctggcacttcctcgac
ctcaccagccgcagtttctcgggcgtcatcaaggaggtcgaaggggaccttgcgagagtg
atctgcttattctacctggtgctacgaggactggacacgatcgaagacgacatgacgatc
cccgacgagaaaaaacagccgctgctccgacaattccacaaactcgccgtcaagcccgac
tggacgttcgacgagtgcggccccaacgaaaaggaccggcagctgctggtcgaatggacc
gtcgtgagcgaggagctcaaccgcctagacccacgctatcgggagatcatcctcgacgtc
accgaaaagatgcagtacggcatggccgactacgcgcacaaggccgcggcgaccgacgag
ctctacatcgagaccgtcgacgagtacaacctctactgccactacgtcgccggcctcgtc
ggcgagggcctcacccgcttctgggccgcgtccggcaaggaggccgcgtggctcggcgac
cagctcgagctcaccaacgccatgggcctcctcctccagaagacgaacatcatccgcgac
ttccgcgaggacgccgaggagcgccgcttcttctggccgcgcgaggtctggggcgccgcg
ctctacggcaaggcggtcgggcgcgcaggcggcttcgcggacatcacggagctctacacg
cccggcaacgagaagcaggcgctgtgggtgctcagcgggatggtcgtcgacgtgctcggc
cacgcgacggacgcgctcgactacctgcgcctgctcacgaagcagtccatcttctgcttt
tgcgcgatcccccagacgatggccatggcgaccctcagcctgtgcttcatgaactacgac
atgttccagcggcacatcaagatccgcaaggccgaggccgcctcgctgatcatgaagtcc
acgaacccgcgcgacgtcgcgtacatcttccgcgactacgcgcgccgcatccacgcccgc
gcgcttcccgacgacccctccttcctccggctctccgtcgcctgcggccgcatcgagcag
tggtgcgagcgccactacccctccttcgtccgcctccagcaggtctccggcggcgtgcag
tacgacccgcgcgacgtccgcacgcgcgtcgtccaggccgccgaggcgcgcgaccaggcg
ctcgcgaaggagaagcgcatgctcgagtaccgcgagcgcgcggcggccgcgaacgggaag
ggcgcgaacgggctgctggaggaccgcaagcctgcgcaggaggagctgagcaccgtcgcg
ctgctgctgtacgtcgcgggcgggttcctcgtcgtccttgcgatcacgcttgggttcgcg
tgggtgctgctcacgtacttccagtag
DBGET
integrated database retrieval system
