KEGG   Dichomitus squalens: DICSQDRAFT_127846
Entry
DICSQDRAFT_127846 CDS       T03133                                 
Name
(RefSeq) PIN domain-like protein
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
dsq  Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_127846
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     DICSQDRAFT_127846
SSDB
Motif
Pfam: GEN1_C XPG_I XPG_N SH3-A_UBE2O
Other DBs
NCBI-GeneID: 18834417
NCBI-ProteinID: XP_007367059
JGI: 127846
UniProt: R7SWK0
LinkDB
Position
Unknown
AA seq 604 aa
MGVPGLWDVLRPAGKMRSLTHLSVKDGFEANPDGKRGFRVGIDASIWFYHATYGREGENP
ELRTLFFRCTRLMGMPFLPLFVFDGPKRPEIKRGKRISGKNHWMVQGMQEIISAFGFEWR
MASGSVAPGEAEAELAYLNRIGVIDAVLSDDVDTFLFGAKLVVRNPSATLSGNRTNPMKN
AAGKDDGNHVMTYAAADLRAHPDIQLTQGGLVLVGVLRGGDYSDGLHGCGVQTAHGLARA
GFGDALLDAARTLPRDALAAFLARWREDVRVELRTNARGCLPRKCAALARAVPEDFPSVD
VVLAYARPVTSEAKGAAHRNANVAWDRDPDLGRIAGLCEMYFEWGVKEIIVKRFSTVLWP
AAVLRILRRAAILRDGEAGAGRGAGALGERGEEGEEPGTPPRKGGSGRGALPGTPSSVIA
KHFSTMALGGPSRGAGRTQDSDGEEEEEGERLIVKIHSAREHPSTDRIREYRLEVAPAQL
VRLCEAGVRGLRTALPPDLSDDDEEEEVDDDDEGGGKRKGRRGKKAPPDPESHLRMWLPA
CMVEMVEPEMVDEFEGVQRWKAEKKAGKGGKAAGQGQGNEGKGEGWRKCGGRSEEQSEQD
FEQR
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgggtgtgccaggactttgggatgtcctgcgcccagcagggaagatgcgctcgctcaca
cacctatcggtcaaggacggtttcgaggcaaacccagacggcaagcgcggctttcgcgtc
ggcatcgatgccagcatatggttctaccacgcaacatacggccgcgagggcgagaacccc
gagctccgcaccctcttcttccgctgcacccgactcatgggcatgcccttcctgcccctc
ttcgtcttcgatggccccaagcggcccgagatcaagagaggcaagcgcatcagcggcaag
aaccactggatggtccagggcatgcaggagatcatctcggcgtttggcttcgagtggagg
atggcgagtggctctgtcgctcccggtgaggccgaggccgagctagcatacctcaaccgc
ataggggtcatcgacgccgttctctccgacgatgtcgacaccttcctcttcggtgccaag
ttggtcgtccgcaacccgagcgcgactctatccgggaaccgcaccaaccccatgaagaac
gccgcgggcaaggacgacgggaaccacgtcatgacctacgccgccgccgacctccgcgcg
caccccgacatccagctcacccagggcggcctcgtcctcgtcggcgtcctccgcggcggc
gactactcggacggcctgcacggctgcggcgtccagaccgcccacgggctcgcccgcgcc
ggcttcggcgacgccctcctcgacgccgcgcgcaccctcccgcgcgacgcgctcgcagcg
ttcctcgcgcgctggcgcgaggacgtccgcgtggagctcaggacgaacgcacgcgggtgc
ctcccgcgcaagtgcgccgccctcgcgcgggccgtgcccgaggacttcccgagcgtagac
gtcgtgctcgcgtacgcgcgcccggtcacgtccgaggcgaagggcgccgcgcaccggaac
gcgaacgtcgcgtgggacagggacccggacctggggcgcatcgcgggcttgtgcgagatg
tacttcgagtggggggtgaaggagatcatcgtgaagcggttcagtaccgtgctgtggccc
gcggccgtcctgcgcatcttgaggcgcgcggcgatcttgagggacggggaggcgggggcc
gggcgtggggcgggagcgctgggcgagcggggggaggagggagaggagccgggcacccct
ccgaggaagggcgggagtgggcgaggtgcgctgccgggcacgccttcgagcgtgatcgcg
aagcacttttcgaccatggcgctgggcggtccatcacgcggcgccgggaggacacaggac
agcgacggggaagaggaagaggaaggggagcggcttatcgtgaagatccactccgcgcgc
gagcacccctccacggaccgcatccgcgagtaccgtctcgaggtcgcgcccgcgcagctc
gtccgcctgtgcgaggccggggtcagggggctgcgcacggcgctccccccggacctgtcc
gacgacgatgaggaggaagaggtcgacgacgacgacgagggcggggggaagaggaagggc
aggagagggaagaaggcgcccccggacccggagagccatctgaggatgtggctgccggcg
tgcatggtcgagatggtcgagccggagatggtcgacgagttcgagggcgtgcagcggtgg
aaggcggagaagaaggcggggaagggcgggaaggcggcggggcagggccagggcaacgaa
ggcaaaggcgaaggctggcgcaagtgcggaggccgttccgaagaacagtcggagcaagac
ttcgagcagcgttga

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