Dichomitus squalens: DICSQDRAFT_127846
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Entry
DICSQDRAFT_127846 CDS
T03133
Name
(RefSeq) PIN domain-like protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_127846
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
DICSQDRAFT_127846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEN1_C
XPG_I
XPG_N
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
18834417
NCBI-ProteinID:
XP_007367059
JGI:
127846
UniProt:
R7SWK0
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MGVPGLWDVLRPAGKMRSLTHLSVKDGFEANPDGKRGFRVGIDASIWFYHATYGREGENP
ELRTLFFRCTRLMGMPFLPLFVFDGPKRPEIKRGKRISGKNHWMVQGMQEIISAFGFEWR
MASGSVAPGEAEAELAYLNRIGVIDAVLSDDVDTFLFGAKLVVRNPSATLSGNRTNPMKN
AAGKDDGNHVMTYAAADLRAHPDIQLTQGGLVLVGVLRGGDYSDGLHGCGVQTAHGLARA
GFGDALLDAARTLPRDALAAFLARWREDVRVELRTNARGCLPRKCAALARAVPEDFPSVD
VVLAYARPVTSEAKGAAHRNANVAWDRDPDLGRIAGLCEMYFEWGVKEIIVKRFSTVLWP
AAVLRILRRAAILRDGEAGAGRGAGALGERGEEGEEPGTPPRKGGSGRGALPGTPSSVIA
KHFSTMALGGPSRGAGRTQDSDGEEEEEGERLIVKIHSAREHPSTDRIREYRLEVAPAQL
VRLCEAGVRGLRTALPPDLSDDDEEEEVDDDDEGGGKRKGRRGKKAPPDPESHLRMWLPA
CMVEMVEPEMVDEFEGVQRWKAEKKAGKGGKAAGQGQGNEGKGEGWRKCGGRSEEQSEQD
FEQR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgccaggactttgggatgtcctgcgcccagcagggaagatgcgctcgctcaca
cacctatcggtcaaggacggtttcgaggcaaacccagacggcaagcgcggctttcgcgtc
ggcatcgatgccagcatatggttctaccacgcaacatacggccgcgagggcgagaacccc
gagctccgcaccctcttcttccgctgcacccgactcatgggcatgcccttcctgcccctc
ttcgtcttcgatggccccaagcggcccgagatcaagagaggcaagcgcatcagcggcaag
aaccactggatggtccagggcatgcaggagatcatctcggcgtttggcttcgagtggagg
atggcgagtggctctgtcgctcccggtgaggccgaggccgagctagcatacctcaaccgc
ataggggtcatcgacgccgttctctccgacgatgtcgacaccttcctcttcggtgccaag
ttggtcgtccgcaacccgagcgcgactctatccgggaaccgcaccaaccccatgaagaac
gccgcgggcaaggacgacgggaaccacgtcatgacctacgccgccgccgacctccgcgcg
caccccgacatccagctcacccagggcggcctcgtcctcgtcggcgtcctccgcggcggc
gactactcggacggcctgcacggctgcggcgtccagaccgcccacgggctcgcccgcgcc
ggcttcggcgacgccctcctcgacgccgcgcgcaccctcccgcgcgacgcgctcgcagcg
ttcctcgcgcgctggcgcgaggacgtccgcgtggagctcaggacgaacgcacgcgggtgc
ctcccgcgcaagtgcgccgccctcgcgcgggccgtgcccgaggacttcccgagcgtagac
gtcgtgctcgcgtacgcgcgcccggtcacgtccgaggcgaagggcgccgcgcaccggaac
gcgaacgtcgcgtgggacagggacccggacctggggcgcatcgcgggcttgtgcgagatg
tacttcgagtggggggtgaaggagatcatcgtgaagcggttcagtaccgtgctgtggccc
gcggccgtcctgcgcatcttgaggcgcgcggcgatcttgagggacggggaggcgggggcc
gggcgtggggcgggagcgctgggcgagcggggggaggagggagaggagccgggcacccct
ccgaggaagggcgggagtgggcgaggtgcgctgccgggcacgccttcgagcgtgatcgcg
aagcacttttcgaccatggcgctgggcggtccatcacgcggcgccgggaggacacaggac
agcgacggggaagaggaagaggaaggggagcggcttatcgtgaagatccactccgcgcgc
gagcacccctccacggaccgcatccgcgagtaccgtctcgaggtcgcgcccgcgcagctc
gtccgcctgtgcgaggccggggtcagggggctgcgcacggcgctccccccggacctgtcc
gacgacgatgaggaggaagaggtcgacgacgacgacgagggcggggggaagaggaagggc
aggagagggaagaaggcgcccccggacccggagagccatctgaggatgtggctgccggcg
tgcatggtcgagatggtcgagccggagatggtcgacgagttcgagggcgtgcagcggtgg
aaggcggagaagaaggcggggaagggcgggaaggcggcggggcagggccagggcaacgaa
ggcaaaggcgaaggctggcgcaagtgcggaggccgttccgaagaacagtcggagcaagac
ttcgagcagcgttga
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