Dichomitus squalens: DICSQDRAFT_131932
Help
Entry
DICSQDRAFT_131932 CDS
T03133
Name
(RefSeq) CDK-activating kinase assembly factor
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
dsq
Dichomitus squalens
Pathway
dsq03022
Basal transcription factors
dsq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DICSQDRAFT_131932
09124 Replication and repair
03420 Nucleotide excision repair
DICSQDRAFT_131932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_131932
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_131932
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DICSQDRAFT_131932
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DICSQDRAFT_131932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
18834849
NCBI-ProteinID:
XP_007360981
JGI:
131932
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MAQRNSWLRGTTIRKSGPSTAASTRTGTPTQVQSTSTTIFGGGVKDPSGRTSEYFSMDDQ
CPVCKSDRYLNPKLRLLVSACYHKMCESCIDRLYTLGPAPCPICNKILRKLAFTPQTFED
LTVEKEVAVRRRIAKEFNKRMEDFPDLRAYNDYLEWVEEITFNLINDIDVAETEARIRQY
RQENAALIELNIKREEEYQRYLQEQEEAERQERELRAQELRRLEEEEREEREKAKQGLID
KLEMSDKDAARLVAKSRAEAQKRASARAASSSSFSQSSARLLRSRAAQSTVIPDVPHVPL
QDNYYAYDDLFTMRDTYYDPVSEAVRKDREGIMRAGGYMVEQAWQRALRCAVAGLEIAPL
TGVPAPPQEAMAIDSESSADVVMANA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacgtaacagctggcttcgagggacaaccatccgcaagtctggcccgtcaacc
gcggcgagcacgcgtacaggtacgccgacgcaggtgcagagtacatccacgacaatattt
ggtggaggagtgaaggatccgtctggacgaacgtctgagtatttttctatggatgaccaa
tgcccggtatgcaagtcggataggtacctcaacccgaagttgcggctgcttgttagcgcc
tgttaccacaagatgtgcgagtcgtgcatcgaccgcttatatacgcttggccccgcacca
tgtcccatttgcaacaaaattctacgaaagcttgcgttcaccccacagaccttcgaggac
ctcacagtggagaaagaggttgccgtgaggcggagaatagccaaagaattcaacaagcga
atggaggactttcccgatcttcgtgcatacaatgattatcttgaatgggtcgaagaaatt
accttcaatctgattaacgacatcgacgtcgctgagaccgaggctcgcattcgacaatac
cgccaggagaacgccgccctcatcgaactcaacatcaagcgcgaggaagagtaccagcgc
taccttcaagaacaagaagaggccgaaaggcaagaacgcgagctgcgcgcgcaggagctt
cgccgactcgaagaggaagagcgtgaggagcgcgagaaggcgaagcaaggactcatcgac
aagctcgagatgagcgacaaggacgccgcccgactggtcgcgaagtctcgtgcagaagcg
cagaaacgcgcgtccgcgcgtgctgcgtcgagcagctccttcagccagagcagtgctcgt
ttacttcgctcccgcgctgcccagagtaccgtcattcccgatgtgccgcacgtgccgctg
caggacaactattacgcgtacgatgacctgttcacgatgcgcgacacgtactacgaccct
gtgagcgaggccgtgcggaaggatagggagggcatcatgcgcgcaggtggttacatggtc
gagcaggcttggcagcgggccttgcggtgtgccgtagcgggtctggaaatcgctcctctc
actggcgtcccagctcctccccaggaggccatggctatagacagtgagagttccgcagat
gtggttatggcgaatgcatga
DBGET
integrated database retrieval system
