KEGG   Dichomitus squalens: DICSQDRAFT_132187
Entry
DICSQDRAFT_132187 CDS       T03133                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K08266  target of rapamycin complex subunit LST8
Organism
dsq  Dichomitus squalens
Pathway
dsq04136  Autophagy - other
dsq04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    DICSQDRAFT_132187
   04136 Autophagy - other
    DICSQDRAFT_132187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsq04131]
    DICSQDRAFT_132187
Membrane trafficking [BR:dsq04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    DICSQDRAFT_132187
   mTORC2 complex
    DICSQDRAFT_132187
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Aladin WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_IFT140_2nd Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Nucleoporin_N Beta-prop_SPT8 Hira Beta-prop_ACSF4 WDR54 Tricorn_2nd Beta-prop_WDR35_TULP_N PALB2_WD40 Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 18834881
NCBI-ProteinID: XP_007361284
JGI: 132187
LinkDB
Position
Unknown
AA seq 312 aa
MSVILVTGSYDHEIRFWEAWSGICSRTIPRAAESGQVNRLAISPDKRLLAAAIHKKAYIY
EIAAAPSAGPVAIYEGHNGNITAVCFHSEGKWLVTGSEDGTIKIWDLRSSSHLHRNYDNE
APVNDVVVHPNQGELISCDQAGRIKQWDLSENICTHELTPGGDTPMRSISLASDGSCLVA
GSVKGKCYVWKINDERSDLPRFQAVTMFQAHTKYLTRLLLSPDVKYLATCSADTTVKIWS
ISPNYEFKLDKTLQGHQRWVWDCAFSADSAYLVTASSDHTARLWDMSTGETVRQYNGHQK
AVVCCALHDGAG
NT seq 939 nt   +upstreamnt  +downstreamnt
atgtctgtcatccttgtaactggttcctacgatcacgaaattcgcttctgggaggcctgg
agcggtatttgttcccggactatacccagggctgctgaatctggacaagtcaaccgactc
gcaatctcccctgacaaacgactcttggctgcagccatccacaagaaggcatacatttac
gagatcgctgcagcgccatctgcgggaccggttgcgatttatgagggccacaatggtaat
atcaccgctgtgtgcttccatagcgaagggaagtggttggtgactggcagcgaggatggc
accatcaagatttgggaccttcgaagtagcagtcacctgcatcgcaactacgacaacgaa
gccccagtgaacgacgtagtggtacatcccaatcagggcgagcttatctcatgcgaccaa
gctgggaggatcaagcagtgggacttgtcggagaacatttgcactcacgagttgactcca
ggaggagatacgccgatgcgttccataagtctcgcttctgacggctcctgcctcgtcgcg
ggtagtgtcaagggaaagtgctatgtatggaagatcaacgatgagagatcggacctacca
aggttccaggccgtcaccatgttccaagctcacacgaagtacctcacccggctactgtta
agccctgatgtcaaatatcttgcgacctgttctgctgataccaccgtaaaaatctggtca
atatcgccaaactatgaatttaagctggataagacattgcaaggtcaccaacgctgggtc
tgggactgtgcattcagcgccgactccgcatatctagtgacagcgtcctccgaccacaca
gcgcggctgtgggacatgtcgacgggagaaacggtacggcaatacaatggacatcagaaa
gcggtggtctgttgtgcgttgcacgatggggcaggctag

DBGET integrated database retrieval system