Dichomitus squalens: DICSQDRAFT_132187
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Entry
DICSQDRAFT_132187 CDS
T03133
Name
(RefSeq) WD40 repeat-like protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
dsq
Dichomitus squalens
Pathway
dsq04136
Autophagy - other
dsq04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
DICSQDRAFT_132187
04136 Autophagy - other
DICSQDRAFT_132187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsq04131
]
DICSQDRAFT_132187
Membrane trafficking [BR:
dsq04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
DICSQDRAFT_132187
mTORC2 complex
DICSQDRAFT_132187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR41
NBCH_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Nucleoporin_N
Beta-prop_SPT8
Hira
Beta-prop_ACSF4
WDR54
Tricorn_2nd
Beta-prop_WDR35_TULP_N
PALB2_WD40
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
18834881
NCBI-ProteinID:
XP_007361284
JGI:
132187
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSVILVTGSYDHEIRFWEAWSGICSRTIPRAAESGQVNRLAISPDKRLLAAAIHKKAYIY
EIAAAPSAGPVAIYEGHNGNITAVCFHSEGKWLVTGSEDGTIKIWDLRSSSHLHRNYDNE
APVNDVVVHPNQGELISCDQAGRIKQWDLSENICTHELTPGGDTPMRSISLASDGSCLVA
GSVKGKCYVWKINDERSDLPRFQAVTMFQAHTKYLTRLLLSPDVKYLATCSADTTVKIWS
ISPNYEFKLDKTLQGHQRWVWDCAFSADSAYLVTASSDHTARLWDMSTGETVRQYNGHQK
AVVCCALHDGAG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcatccttgtaactggttcctacgatcacgaaattcgcttctgggaggcctgg
agcggtatttgttcccggactatacccagggctgctgaatctggacaagtcaaccgactc
gcaatctcccctgacaaacgactcttggctgcagccatccacaagaaggcatacatttac
gagatcgctgcagcgccatctgcgggaccggttgcgatttatgagggccacaatggtaat
atcaccgctgtgtgcttccatagcgaagggaagtggttggtgactggcagcgaggatggc
accatcaagatttgggaccttcgaagtagcagtcacctgcatcgcaactacgacaacgaa
gccccagtgaacgacgtagtggtacatcccaatcagggcgagcttatctcatgcgaccaa
gctgggaggatcaagcagtgggacttgtcggagaacatttgcactcacgagttgactcca
ggaggagatacgccgatgcgttccataagtctcgcttctgacggctcctgcctcgtcgcg
ggtagtgtcaagggaaagtgctatgtatggaagatcaacgatgagagatcggacctacca
aggttccaggccgtcaccatgttccaagctcacacgaagtacctcacccggctactgtta
agccctgatgtcaaatatcttgcgacctgttctgctgataccaccgtaaaaatctggtca
atatcgccaaactatgaatttaagctggataagacattgcaaggtcaccaacgctgggtc
tgggactgtgcattcagcgccgactccgcatatctagtgacagcgtcctccgaccacaca
gcgcggctgtgggacatgtcgacgggagaaacggtacggcaatacaatggacatcagaaa
gcggtggtctgttgtgcgttgcacgatggggcaggctag
DBGET
integrated database retrieval system