KEGG   Dichomitus squalens: DICSQDRAFT_135943
Entry
DICSQDRAFT_135943 CDS       T03133                                 
Name
(RefSeq) cyclin-like protein
  KO
K03124  transcription initiation factor TFIIB
Organism
dsq  Dichomitus squalens
Pathway
dsq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DICSQDRAFT_135943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsq03021]
    DICSQDRAFT_135943
Transcription machinery [BR:dsq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     DICSQDRAFT_135943
 Prokaryotic type
  Archaeal type
    TFB
     DICSQDRAFT_135943
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Guanylin HTH_5 RB_B Cyclin_N Sigma70_r4
Other DBs
NCBI-GeneID: 18835390
NCBI-ProteinID: XP_007365064
JGI: 135943
UniProt: R7T302
LinkDB
Position
Unknown
AA seq 351 aa
MAYAQPFPLAQPPQKALQQTFGPDLAVRLICPECRDPNPNIVEEFSSGDLVCGTCGLVLG
DRIVDTRSEWRTFANDEGDDPSRVGAASDPLMEGIEQLDTTISFKDGGSGLARELQRAAS
RANSSRSERNLLQAFRDISNWCDQFSLPKTISDIAKQLYKRSDEEKLLRGKPLEAVIAAC
IFIACRQAHVPRTFREICNLTHVSKKVLGQCYKALEQAFNLTPGASQDRHAITPSGTTGA
EDLLVRYCNHLALPPNFQPICADIIVKARELGIADGRSPVSIAGGAIYFTCYLLDKPKTV
REISTVAGVSEGTIKLVYKLYYAEKEKLVKEEWIKDGKAKLDRLPVESSSK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcatacgctcagccgttccccctcgctcagcctcctcagaaggccctgcagcagact
ttcggccctgatctcgctgtccgcctcatctgccctgaatgcagagatcccaatccgaac
attgtcgaggaatttagcagcggggacctcgtatgtggcacttgtgggctagtgctgggc
gacaggatcgtcgacacgagaagtgagtggcggacgttcgcgaacgacgagggtgacgac
ccgtcccgtgttggtgcggcgtctgatcccctcatggaagggatagagcagctggacact
accatctccttcaaagacggtggctccggcttggcgcgagagctgcagcgcgcagcctct
cgtgcgaactcttcgcgttcagagcgcaatcttttgcaggcgttccgggacatctcgaac
tggtgcgaccaattctccctcccgaaaaccatctccgatatcgcgaagcagctgtacaag
cggtcggatgaggagaaattgctccgcggcaagcctcttgaggcagtgatcgcagcctgt
atctttatcgcttgtcgacaagcgcatgttccccgtacgttccgcgagatctgcaacctc
acccacgtcagcaagaaggtcctgggacagtgctacaaagcactcgagcaggcgttcaac
ctgacccccggcgcgtcccaggaccgccatgcgatcacccccagcggtaccaccggtgcg
gaggacctgctggtgcgctactgcaatcacctcgcgttgcctccgaatttccagccgatt
tgcgcggatatcatcgtcaaggctcgcgaactgggtattgcggatggccgatcgcccgtg
tctatcgcgggtggcgccatctacttcacgtgctacttgcttgacaagccgaagaccgtg
cgcgagatcagcacggtcgcaggtgtcagcgagggcacgatcaagcttgtctacaagctc
tattatgcggagaaggagaagttggtgaaggaggagtggattaaggatggaaaggcgaag
ctggataggctgccagttgagagcagttcaaagtga

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