Dichomitus squalens: DICSQDRAFT_137261
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Entry
DICSQDRAFT_137261 CDS
T03133
Name
(RefSeq) pseudouridine synthase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsq03016
]
DICSQDRAFT_137261
Enzymes [BR:
dsq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
DICSQDRAFT_137261
Transfer RNA biogenesis [BR:
dsq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DICSQDRAFT_137261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
18835587
NCBI-ProteinID:
XP_007366567
JGI:
137261
UniProt:
R7SYD6
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MFQRYALESGVTTINGKVAKPDTIIKNGDRIENVSHRHEPPVTSTPVRIVLHDKERQFIV
IDKPGSIPVHAAGRYFRNSLVEILKNDFGFEKVYTVNRLDRLTSGLMILPLNSALANTLS
KEFVNGEVRKEYVARCKGKFLEEEIVCEEPLLTVDRQMGLNIVHPEGKPAKTIFNRLHYD
ENTDTSVLRCRPLTGRSHQIRVHLQYLGHPIANDPIYSDARIWGESLGKGGIDLAPSEER
AAPQAPVQFQFDPSNNPEAINRAVEGEEVGVAERKLLPRETGHDIGMGSPVPLSAEAVGI
ITRLRNMKDEAEDWGRWRDVVFRAKAALSPHGFTIPLPPQNKRKRGGPALASAPSTPADS
TPGTPAGALEAVAIDVTPAAAEVSEESLMNQLTPDDVAKLAVSSAASSTSVPSPALASEV
PIPDPTPPPVAESSAPDTPDVVSDVDGMHYCPECFVPLHPDPKPESLYIFLHALRYTTSL
GTFETETPEWAAKDWEWER
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaggtacgcactcgagtccggagtaaccacgatcaacggaaaggttgcaaaa
ccggacaccattatcaagaatggcgatcgcatcgagaacgtttctcatcggcacgaaccc
cccgtgacatccacgcctgtgcgaatagtgctgcacgacaaggagcggcagttcatcgtc
atcgacaagcctggctccatccccgtgcatgctgcaggacgatactttcgcaatagtttg
gtggaaatcttgaagaatgatttcgggtttgagaaagtctacaccgtgaacagattggac
aggcttacctcaggtttgatgatcctcccactcaattccgcactagccaatacgctctcg
aaggagttcgtgaatggcgaggttaggaaagagtacgtggctcggtgtaagggcaagttc
ctagaggaagagatcgtctgcgaagagcccctcctcaccgtggacaggcagatgggtctg
aatatcgtgcatcctgagggcaagcctgcgaagactatcttcaatcgcctgcattatgac
gagaacactgacaccagcgtgcttcgctgtcgtcctctaactggtcgatcgcaccagatc
cgtgtacacctgcaatacctcggccaccccatcgcaaacgaccccatctattcagatgct
agaatttggggcgagagccttggcaagggcgggatcgacctcgctccgagcgaagagcgc
gccgctccgcaggcacccgtccagttccagttcgacccttcgaacaacccggaagcaatc
aaccgcgctgtcgagggggaggaggtcggagttgcggagaggaagctgctcccgcgtgag
acggggcacgacattgggatgggctccccggtgccgctctccgccgaggctgttggaatc
atcacgcgactgagaaatatgaaagacgaggcagaggactggggtcgctggcgagacgtc
gtcttccgtgccaaagcagctctctcaccacatggcttcacgatcccccttcctccccaa
aataagcggaaacgcggtgggcctgcccttgcgtctgcaccgagcacccctgcagacagc
acacccggaacgcccgctggtgcactagaagcggtggccattgacgttactcctgctgca
gcagaggtttccgaggagtcgctcatgaaccaactcacccccgacgatgtcgccaagcta
gcagtaagttcggctgcttcttcaacatccgtgccttctcccgcgctcgcctctgaagta
cctatacctgacccgacgcctccacctgtggcggaatcctccgcgccggacacgcccgat
gttgtatcggatgtcgatggtatgcactattgtccggagtgcttcgttccgttgcatccg
gacccgaagccggagtcattgtatatcttcctgcatgcactgcgctacacaacgagttta
ggtaccttcgagacggagacgcccgagtgggcggcaaaagattgggagtgggagcggtag
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