Dichomitus squalens: DICSQDRAFT_139629 Help Entry DICSQDRAFT_139629 CDS       T03133                                  Name (RefSeq) Sec63-domain-containing protein   KO K12854   pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6] Organism dsq  Dichomitus squalens Pathway dsq03040   Spliceosome Brite KEGG Orthology (KO) [BR:dsq00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     DICSQDRAFT_139629  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:dsq03041]     DICSQDRAFT_139629 Enzymes [BR:dsq01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      DICSQDRAFT_139629 Spliceosome [BR:dsq03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     DICSQDRAFT_139629  Complex C    U5 SnRNP specific factors     DICSQDRAFT_139629 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sec63 DEAD SNRNP200_wHTH Helicase_PWI ResIII BRR2_plug Helicase_C AAA_22 PhoH Motif Other DBs NCBI-GeneID:  18835892 NCBI-ProteinID:  XP_007369099 JGI:  139629 UniProt:  R7ST36 LinkDB All DBs Position Unknown AA seq 2168 aa AA seqDB search MSAKRDLSGYNYASISSLVLTADRSVLPRRDKEPDGAPTSLVGRIDPREMGSRVQREAPK DLDKKKKKAADRQEAAERPQKRRAADVTGFGYTDIIEATEDVEGLSYRPRTAETREVYEL ILANVHQALGDQAQDVVRSAADMVLETLKNENVKDFDKKKEVEDVLGPISNESFSQLINL SKKITDYGVEDEQTADPDLERKEAEIDDEMGVAVVFDEEEEEEEEEEGFEVRDESDEEED EAEEGAERPPESLEGDDELVIGGSSAGHQGKAHVDKDIVSPHAIDGFWVQRQISEVYPDP VTAADKASSVLSILGSESSVRDCENELMDLFEYQHFPLIRKFVKNRDVIVWCTKLMRSDA DERVNIEVAMREKGVGWILRELAGDRKAKAGSDAMDVDSKPKVEAVSKKATLAPGSTVQP KATVDLESMAFSQGGHLMSNKKCKLPEGSFKRAKKGYEEIHVPAPKSKPVQDSELVQIQD LPEWAREGFKGYRSLNRIQSKLYPIAFGTDEPLLLCAPTGAGKTNVALLTILNELGKYRD IDSGTLDLDAFKVVYIAPMKALVQEMVGNFSSRLAVYGIKVGELTGDSQMTKQQISETQI IVTTPEKWDVITRKSTDTSYTNLVRLIIIDEIHLLHDERGPVLESVIARTIRRMEQTGEY VRLVGLSATLPNYQDVATFLRVDQSKGLFYFDASYRPCALQQQFIGVTEKKAIKRYQVMN EVCYEKVLDQAGKNQTLVFVHSRKETAKTAKFIRDMAIEKETITQFVKPEGATREILLEE ANNVKDPNLKDLLQFGFGIHHAGMSREDRGLVEELFADGHLQVLVCTATLAWGVNLPAHT VIIKGTQIYNPEKGRWVELSSQDVLQMLGRAGRPQYDTYGEGIIITNHSELQYYLSLLNQ QLPIESQFVGKLTDNLNAEIVLGTIRNRDEAVQWLGYTYLYVRMLKDPVLYSVGVDYLEG DPTLVQKRADIVHTAAALLEKCYLIKYERSTGRFQSTELGRIASHYYVTYSSMATYNQHL RSTMSQLELFRVFALSNEFKLIPVRQDEKLELGKLLERVPIPVKESVEEPAAKINVLLQA YISQLKLEGFALVADMVYVQQSAGRIMRAIFEICLKRGWAVPAKAALDMCKMVERRMWGS MTPLRQFKGVPNEIIRKAEGKQFPWYRYFDLNPPEIGELIGIPNAGRLVHRLVHSFPKLQ LSAQVQPITRTLLRIDLTIIPDFRWDEKVHGAAESFWILVKDVDGEIILFHDTFILRQRY AEDEHYVTLTVPMFEPVPPNYYISIVSDRWLQAETRLPISFKHLILPEKFPAPTPLLDLQ PLPLSALHNKEFENIYSSTIQTFNKIQTQVFQALYTTDDNVFIGAPTGSGKTICAEFALL RLWSKREQQRAVCIEPYQEMVDMRVEEWRKRFGNLQGGKEIVALTGETSADLRLLEKGDL IVCTPTQWDVLSRRWRQRKNVQTIGLLIADEVQLVGGEVGPTYEVVISRTRYVSAQTELK TRIIACGVSLANARDLGEWMGAPSHAIFNFPPSARPLDMDIHIQSFQIPHFPSLMIAMSK PAYLAINEYSPHKPVIIFVPSRRQCRLTADDIITHCNADEDSKRFLHVEEEDLAPHLEHV TDAGLKETLQHGVGYYHEALNKQDKRIVERLFQHGAIQVLIASKDTAWSLPVSSYMVIIM GVQFYEGKEHRYVDYPVMDVLQMMGRACRPLEDEKSRAVLMCQQTRKDFYKKFLAEGLPI ESHLPTHMLHDYFLAEIAVKTVENKQDAMDILTWTYFYRRMTRNPNYYNLHNVSHQHLSD HLSELVENTLNDLVNSKCISIEDEMDVSPLNLGMIAAYYNISYVTVEVYTLSLKERTKLK GLLEVVSSSAEFESIPIRRHEDVLLRRIYDRVPVKLEKADFEAPHFKTFLLLQAHFSRLT LPPDLAADQVLVLEKVLNLLSACVDVMSSNAWLNALGAMDLSQMCVQACWETDSPLKQIP HFEPDVIKRCKDAGVETVYDIMELEDDKRNELLQMDARQMRDVATFVNSYPTLDVTFELA KGDYTAGAPIQIQVSLSKDADEDMDTPGEDDEAVVAPFYPKKKLTNWWVVVGEPKTKQLL AIKKVTVHRGLNVRLEFSLPQGQHALKLYVICDSYMGADHDIDIDPVDVAEGEESDSEEE SDEDAMEE NT seq 6507 nt NT seq  +upstreamnt  +downstreamnt atgtcggccaagagggatctgtctggctacaactatgcctccatctcttctctcgttctc accgccgaccgctccgtcttgccgcgtcgagacaaggaacccgatggtgcccccacgtct ctagtcggccgtattgatcccagggagatggggtcgcgtgtccagcgcgaagctcccaag gacctcgacaagaagaagaaaaaggcagccgacagacaggaggccgcggaaaggccgcag aagcggagagcagcggacgtgactggcttcgggtacaccgacatcatcgaggcgaccgaa gacgtcgaagggctctcgtaccgcccacggacggcggagacgcgcgaggtttacgagctc atcctcgcgaacgtccaccaagcactcggtgaccaagcgcaggatgtcgttcgaagtgcc gcagacatggtgctggagacgctgaagaacgaaaacgtgaaggacttcgacaagaagaag gaggtcgaggacgtccttggtccaatctcgaacgagtcgttttcgcagctaatcaacctg tcgaagaagatcactgactacggcgttgaggatgagcagacggcggaccccgacctcgag agaaaggaggcagagattgatgatgagatgggtgtcgcggtggttttcgacgaggaggaa gaggaagaagaagaagaagagggcttcgaggtacgagatgaaagcgacgaggaggaggac gaggcagaggagggagcggagcggccgccggagtcactagagggagacgacgagctggtc atcggcggatcctcagcaggtcatcaagggaaggcacatgtcgacaaggatatcgtctct ccgcacgcgatcgacggcttctgggtgcagcggcagatatctgaagtgtaccccgaccct gtcacggccgccgacaaggcgtcttcggtgctctcgatactcggttcggagtcgagcgtc cgcgactgcgaaaacgagttgatggacctgttcgaataccagcacttccccctgattcgg aagtttgtcaagaaccgggacgtcatcgtgtggtgcacgaagctgatgcgtagcgatgca gacgagcgtgtcaacatcgaggtggcgatgcgggagaagggagtaggctggattctgcgc gagctggccggagataggaaggcgaaggcgggctcggacgcgatggacgtcgactcgaag cccaaggtcgaggcggtttccaagaaggcgacgcttgctcctggttcgacggtacagccc aaggctactgtggacctggagagcatggcattcagccagggtggtcacctgatgtcgaac aagaagtgcaagctcccggaagggtcgttcaagcgggcgaagaagggctacgaggagatc catgtgcctgcaccgaagtcgaagccggtgcaagattcggagcttgttcagatccaggac ctgccggaatgggcgcgcgagggattcaagggatatcggagcctgaaccggattcagagc aagctctaccccatcgcgttcgggacggatgagccactgctgctttgtgctcctaccggt gctggaaagacgaatgtcgctctgctgacgattctgaacgaactcgggaagtaccgcgat atcgactcgggtacgttggacttggacgcgttcaaggtggtatacatcgcgccgatgaag gcgctcgtgcaggagatggtcggcaactttagctcgcgtctggcggtgtatgggatcaag gtcggcgaactcactggcgactcgcaaatgacgaagcagcagatctcggagacgcagatc atcgtgacgaccccggagaagtgggatgtgatcacgcgcaagagtacggacacgagttat acgaacctcgtacgtctcatcatcatcgacgagattcacttgttgcatgatgaacgtggt ccagtgctcgagtcagtgatcgcacggacaatccggcggatggagcagacgggcgagtac gtgcggctggttggtctgtcagctacgcttcccaactaccaggacgtggcaacgttcttg cgcgtcgaccagtcgaagggcctgttttatttcgacgcgtcgtaccggccttgcgcgctc cagcagcagttcatcggggtgacggagaagaaggctatcaagcggtaccaggtgatgaac gaggtttgctacgagaaggtgctcgaccaagccgggaagaatcagacgctcgtgttcgtc cactcgcggaaagagacggcgaagacggcgaagttcatccgcgacatggcgatcgagaag gagacgatcacgcagttcgtcaagcctgagggcgccacgcgcgaaattcttctggaagag gcgaacaacgtcaaggacccgaacctcaaggacctcctccagttcggctttgggatccac cacgccggcatgtcccgcgaggatcgcggtctggtcgaggagttgttcgcggacggccac cttcaggtgctcgtttgtaccgcgacgctcgcgtggggcgtcaaccttcctgcacatacc gtgatcatcaagggcacgcagatctacaacccggagaagggccgctgggtcgagctttcg tctcaggacgtgctgcagatgctcggtcgagcgggtcgtccgcagtacgacacttacgga gagggcatcatcataacgaaccactccgagcttcagtactacctcagcctgttgaaccag cagctgccgatcgaatcgcagttcgtcgggaagttgacggacaacctgaatgctgagatt gtgcttggtaccatccggaaccgcgacgaggccgtccagtggttgggttacacatacctc tacgtccgtatgctcaaggatccagttctgtacagcgtcggcgtcgactacctagaaggt gatccgacgcttgtgcaaaagagggcggatatagttcatactgctgcagcgctcctggag aagtgctaccttatcaagtatgagcgttccactggccgcttccagagcacggagttgggt cgcattgcgtcccactactacgtcacctacagctctatggccacgtacaatcagcacctc cggtcgaccatgtcgcagctcgagctcttccgcgtatttgccctctcgaacgagttcaag ctcatcccagtccgtcaagatgagaagctcgaactcggcaaactgctcgaacgcgtccct attcccgtgaaggagtctgtagaggagccggcagcgaagattaacgtgctacttcaagca tatatatcacaactgaagctcgaagggttcgctctggttgcggacatggtctacgtgcag cagtctgctggacgaatcatgcgcgctatctttgagatttgcctcaagcgtggctgggct gttcccgcgaaggcagcgctcgacatgtgcaagatggtggagcgcaggatgtggggttct atgacgccgctgcgtcagttcaagggcgtcccgaacgagattattcggaaggctgagggc aagcaattcccttggtaccgctacttcgacctcaacccaccagagattggcgagcttatc ggcattccgaacgctggccggttggtccacagacttgtacacagcttccctaagctccag ctgtcggcccaagtccagcccattactcgtacactcttgcgcatagacttgactataatt cctgacttccgttgggacgaaaaggttcacggcgcagccgagtcgttctggattttggtt aaggatgttgatggcgagatcatcctcttccatgatacgttcattcttcgtcaacgatac gctgaagacgagcactacgttaccctcaccgttcccatgttcgagccggttccccccaac tactacatctcaatcgtctcagaccgctggctgcaagctgagacccgcctccccatctcc ttcaagcacctcatcctccccgagaagttcccggctccgactcctcttctcgacctccag cccctccccctctccgcgttgcacaacaaggaattcgagaacatctattcctcgacgatc cagacattcaacaagatccagacccaggtcttccaggcgctttacacaacagacgacaac gtcttcatcggtgcccccactggcagtggcaagacgatctgtgctgagtttgcccttctc cgtctctggagcaagcgcgagcagcaacgagctgtctgcatcgaaccttatcaggagatg gtggatatgcgtgtcgaggagtggcgcaagaggttcggtaacctgcagggcggcaaggag atcgttgctttgacaggcgaaacgagcgcagacctgcgtctgctcgaaaagggcgatctg attgtctgcacgccgactcaatgggacgtactctcaaggagatggcgtcaacgcaagaac gtgcagacgatcggcctcctcatcgcggacgaagtgcagcttgtgggtggcgaggtcggc ccgacgtacgaggttgtcatctcgcgtacccggtatgtctctgcgcagacggagttgaag actcgtatcatcgcgtgcggcgtctccctcgccaatgctcgcgatctcggcgagtggatg ggtgcgccatcacatgcaatcttcaacttccctcctagtgctcgtcccctcgatatggac atccacatccagagcttccagattccccatttcccctcgctcatgatcgctatgtcgaag cctgcctacctggctatcaacgagtactcaccacacaagcccgtcatcatctttgtccct tcgcgtcgccaatgtcgtctcaccgccgacgacatcatcacgcactgcaacgctgatgag gattcaaagcgtttcctacatgttgaagaggaagacttagcgccacacctagagcatgtc accgacgcaggcctcaaagagaccttgcagcacggtgtcggctactaccatgaagccctc aacaagcaggacaagcgcatcgtcgagcgattgttccagcacggtgccatccaggtcctc atcgcttcgaaagacactgcgtggagcttgcctgtgtccagctacatggtcatcatcatg ggcgtgcaattctacgagggcaaggaacaccgttacgtcgactaccccgtcatggatgtt ttgcagatgatgggtcgcgcgtgtcgtccgcttgaggacgagaagagtcgcgctgttctc atgtgtcagcagacaaggaaggacttctacaagaagttccttgctgagggtctccccatt gagtcgcatctgccgacccacatgctccatgactactttttggccgagatcgctgtcaag acggtcgagaacaagcaggatgctatggatatcttgacatggacgtacttctaccgacgg atgacgcggaacccgaattactacaatctgcacaacgtcagccaccagcacctctccgac catctgtcagagctggtcgaaaacacgctcaacgatcttgtcaactcgaagtgcatctct attgaggacgagatggacgtatcgccattgaatctcggtatgattgccgcgtactataac atctcttacgtgacggtcgaggtgtatacactatcgttgaaggagcgcaccaagctcaag ggtttgttggaggttgtatcgtcatcggcggagttcgagtcgatccccatccgtcgacac gaagacgtccttctgcgccgaatctacgaccgcgtccccgtcaagctcgagaaggcagat ttcgaggcaccgcacttcaaaaccttccttctccttcaggcgcacttctcccgtctcact cttcctcccgatctcgcagccgaccaggtgctcgtcctagaaaaggttctcaaccttctc tccgcgtgtgtcgacgtcatgtcgtcgaacgcgtggctcaacgctctcggtgcaatggac ctatcgcagatgtgtgtacaggcgtgctgggagacggactcgcctctgaaacagatcccg cattttgagccggacgtcatcaagcgttgcaaggatgccggcgtcgagacagtgtacgac atcatggagttggaagatgacaagcggaacgagctactacagatggacgctcgccagatg cgcgacgtcgcgacgtttgttaactcttatcccactctcgacgtcaccttcgagcttgcg aagggcgactacactgccggcgctcctatccagatacaagtctcgctgtccaaggatgca gacgaagatatggacacccctggtgaagacgacgaggccgttgtcgcacccttctacccc aagaagaagcttaccaactggtgggtcgtcgttggcgagccgaagaccaagcagctgctt gcaattaagaaggttaccgtacatcggggcctcaacgtccgcctcgagttctcgctaccg caggggcagcatgcgctcaagctatatgttatctgcgactcttacatgggcgccgatcac gatatcgacattgatcctgttgatgtggccgagggcgaagaaagtgatagcgaagaggag agcgacgaggacgcgatggaggagtag

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