Dichomitus squalens: DICSQDRAFT_142335
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Entry
DICSQDRAFT_142335 CDS
T03133
Name
(RefSeq) splicing factor CC1-like protein
KO
K13091
RNA-binding protein 23/39
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_142335
Spliceosome [BR:
dsq03041
]
Common components
Common spliceosomal components
General mRNP proteins
DICSQDRAFT_142335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
18836255
NCBI-ProteinID:
XP_007360253
JGI:
142335
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSSPNGKVERMDVDRPRSLDRRSKASRDHSTETHRTRRSHRSRSRDRDRERRHRDRDDYD
DRRRRSRSRDRRDRSREKSHRDKDHERDRERDKDRERRRDRDGERRRSERDRAESRHSHR
DRERDRDRDRDRERDKDDRDHRDRRRKRGDDLEEGRDSYIADERAKRKRSDEGGEESSLP
APPPSAGLPPPPPPLADSPRRGTRSREPDRRYGDRLPRRSRDPRDDFDEPLPPRPERERS
RPVSPPRKYVSPAFCQTFNTNVNSHNRRPSPSYEPPQDDPMNDEPSPDDSEARSVFVSQL
AARLTARDLGYFFEDKLGENTVMDSRIVTDRISRRSKGIGYVEFRSVELVDKAIALSGTV
VMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHGGMQLYVGSLHFNLSESDIKQVFEP
FGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQMDGFELAGRTLRVNTVHEKGSA
RYTQQDSLDEAGGGNLNAASRQALMQKLARIDPTPAKMEPIARPNIPQTMQSRSVLMKNM
FNPEEETERDWDKDLAEDVKGECESKYGRVLAIKVEKESQGEIYVKFETVDAAKNAIEGL
NGRWFGGRQITAAFISDAIMQAHQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccgaacggtaaggtggagagaatggatgttgataggcctaggtctctggac
aggcgatccaaggcatctcgagaccactccaccgaaacacaccgaacccggcgttctcat
cgctcccgctcgcgagacagagacagggaaaggcgtcatcgtgaccgcgacgactacgac
gatcgccgcaggaggagccgcagcagagacagaagagataggtctcgcgagaagtcccac
cgcgataaggaccacgaacgcgaccgtgagcgcgacaaggacagggagcgacgaagggac
cgtgacggtgagcgccgtcgtagtgaaagagatagggcggagagtcgacatagccatcga
gaccgtgagagggacagggacagggatcgcgaccgtgagcgtgacaaggacgaccgggac
cacagggatcgccgcagaaagcgtggcgacgacttggaggagggccgtgacagctacatt
gctgatgagagggccaagagaaagcggtccgatgaaggtggcgaggagtcctctcttccc
gctcctccaccgtccgctggactacccccgcctcctccgcctttggcagacagtccgcgt
cgtggaactcgttcccgtgagccggatcgcaggtacggtgacaggttgcctaggcgttct
cgggaccctagagatgacttcgacgagcctcttccgcctcgtccagagagggagcgcagc
cgtcctgtgagccctccgcgcaagtacgtgtcccccgctttctgccagacattcaacaca
aacgtgaactcccataacagacgcccatctccttcgtacgagccacctcaagacgacccc
atgaatgacgagcccagcccagacgactctgaggctcgatccgtctttgtgtctcagctc
gcagcccgtctcacagcccgtgacctgggttattttttcgaggacaagctgggcgaaaac
actgtcatggattccaggattgtcacagacaggatctctcgtcgctccaagggcattggt
tatgtggaattccgctccgttgaactcgttgacaaggctatcgcgctgagtggaactgta
gtgatgggtctacctatccagattcagcacacagaagccgagaggaacaggcttcatcct
ggcgacggcaatctcaaccttccgccgggtgtcagcgctccccatggcggcatgcaactc
tacgtcggctcgctccatttcaacctttcagaatccgacatcaaacaagtgtttgagcca
tttggtgaacttgagtttgtcgatcttcatcgtgatccggtgactgggcgcagcaaaggt
tatgcattcgtacagtacaagcgcgcggaagacgcgaagatggctctcgagcagatggat
ggctttgaattggctggacgaactctccgcgtcaatactgtccacgaaaagggctctgcg
agatacactcagcaagattccctcgacgaagctggcggtggtaacctgaacgcagcttca
cgtcaagcgctgatgcagaaacttgccagaatcgatcccacccctgccaaaatggagcct
atcgctcggcccaacattcctcagaccatgcagtcgaggtccgtcctcatgaagaacatg
ttcaaccccgaggaagaaaccgaacgtgactgggacaaggacctcgctgaagacgtcaag
ggcgagtgcgagtcgaagtatgggcgtgtgctcgccatcaaggttgagaaagagtcacag
ggcgagatttacgtcaagttcgagaccgttgatgctgctaaaaacgccattgaaggtttg
aacggtcgttggtttggtgggcgacagatcaccgctgcttttatctccgatgccatcatg
caagctcaccagtga
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