Dichomitus squalens: DICSQDRAFT_142816
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Entry
DICSQDRAFT_142816 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
dsq
Dichomitus squalens
Pathway
dsq03440
Homologous recombination
dsq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DICSQDRAFT_142816
03460 Fanconi anemia pathway
DICSQDRAFT_142816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsq04121
]
DICSQDRAFT_142816
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_142816
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_142816
Ubiquitin system [BR:
dsq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
DICSQDRAFT_142816
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
DICSQDRAFT_142816
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
DICSQDRAFT_142816
FA (Fanconi anemia) pathway
Downstream FA components
DICSQDRAFT_142816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
18836296
NCBI-ProteinID:
XP_007360660
JGI:
142816
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MTKWHLAESPEPESARKRQRLSSPTYDEHFPITQEEMSAFDEIDKQLSQRALVLPSRSRT
LSAEETEDVELTTANHGASGEGVMGEGDRDGPAAQEWSSSPLEKPSTTQDRADEDAFFTG
AGGGSGFVSATTLPSKPSVDSLAPAASGFTSAAALPLVLKTAKLRASGSFTSKPPDASNA
HANSGEASHNGTITSISSTLGGFGPASALPARPEDPCDDRPSSPPPPQPDYDSWFDSDAS
ALPSDALGFKTARTILEPLEAGEGHASQAPVFAGFTSASGLVQSQSTSHGGSGDSAPEVV
EPSPSASFATGFASAASIGFSSAAKLTGGKSAWQAPSAEALARAAQKMKQWEEEFVREDV
STSVAPAHTNQDIENTRAGPSSSVPQPAAAPSLQTPLRPALRPMENSAPSPAQLPDTPLA
SKNPTHYTNIGGGVQMKNKQFKSPLINKQDRPASASAARLRSSLNPVRASSSKLPAVFTF
GAASTVPTAVPATPARPAPAPESGTSIVTTSPSKGKSLGMTPRRLPGGGLKSAGKAKFTT
PFKLGMAPGEAGRTQLGAKAKAETSVQTPLRVDVRGTPSSSAKGKSVSVARKEYKFFDLN
PRPDRKTLASSGLRPQSYTGDELEDMGINVEELREMSPAMAIYYSFYSAELTNDSAEPLQ
LGPEAAFVQLKELGCRLATQQWVTNHYGLILWKLAGMVCLEPESELDPKTKRWCWREVMR
QLRYRYERELNGGSRPALRLISTEDAPAACPMVLCVSSIITWAPAVVDSEGRPVEPHPEL
EVTDGWYRLRARVDRPLARAVRRGLIKVGTKLAVSGAKLGGDRKESCEILDAYDSTYLDL
SGNSTHLAPWHAKLGFAKDPFIATLDSLTPDGGRVPAMDLIVTKAYPIAYLEFIRNEDGS
TTKLGPRDEKEELRAQDEWLTRRDIAVATIRADLERQIQSLEKISEQLYGIAGPRFEDKV
NKDDPLPSFIEGMYDEMIEDVSRSPRDFFDYLNYMDAGYLYIHTLDQIRLSKERLGEDIE
RELQYICPPRNVRDFRVVVAKDARWCRKEPTRTVQITVWDPMRMVFSEGGSPGDIREGQR
FLVVNLEVNQPSAWMAPGPGSVIYLISKKSARWTNIRSRKC
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtggcatctagcggagtcacccgagcctgagagcgcgcgcaaacgacaacga
ctatcttccccgacgtacgacgagcactttccaatcacgcaggaggagatgagcgcgttt
gatgagatagacaagcagctctcgcagcgagctctcgtccttccttcccgatcgcgaacc
ttgtcggccgaagagacagaggacgtcgaactaactaccgctaaccacggtgcatccgga
gaaggtgtgatgggagaaggcgaccgggatgggccagcagctcaagagtggtcgtcatcg
cccctcgaaaagccttccaccacccaagatcgcgctgatgaggacgcgttcttcacaggt
gctggtggaggcagtggcttcgtctccgctaccacgctcccgtccaagccttctgtcgat
tctctcgctccagctgcctctggctttacatctgcggctgccctccccttggtcctcaag
acggccaagcttcgtgcgtctggtagcttcacttcgaagcctcctgacgcgtccaatgcg
catgcaaattcgggcgaagcctcccataatggaaccatcacctctatatcatccacgctt
ggtggatttggtcctgcatctgcactccctgcgcgaccagaagatccctgtgacgatcgc
ccctcgtcgcctccgcctccacaaccagactatgattcctggttcgattccgatgcatcc
gcgctaccttccgacgcgctcgggttcaagaccgctcgtacgattctggagccattggag
gcaggggagggtcatgccagtcaagctcccgttttcgccggattcacctctgcgtcgggc
ttggtgcagtctcagagtacctcgcatggcgggtctggagacagcgcacccgaagtcgta
gaaccttccccatctgcgtcgttcgctacgggtttcgcgtccgctgcgtcaatcggcttc
agctctgcggcgaagttgactggggggaagagtgcctggcaggcgccctccgcagaagct
ctcgcgcgggctgcacagaagatgaagcagtgggaggaagagttcgtgcgagaagacgtg
tcgacgtctgtagctcctgcccataccaatcaggacatcgaaaacacgcgtgcagggccg
tcctcgtctgtgccgcagcctgccgcagcaccgtctctccagaccccgctgcgtcctgcc
ctgcggccgatggaaaacagcgcgccctccccagcgcagctccccgataccccgctcgcg
tcgaagaacccgacgcactacacgaacatcggcggaggggtgcagatgaagaacaagcag
ttcaagtctccgctcatcaacaagcaggatcgccccgcgtctgcgtctgcggcgcggctt
aggtcgtcgctgaatcctgtccgtgcctcgagttcgaagttacccgcggtgttcactttt
ggcgcagcgagcacagttcctaccgcagtgccggcgacacccgctcgccctgccccagct
ccagagtccggtacttcaattgtcacgacatctccaagtaagggcaagagtctggggatg
acccctcgcaggctgccgggcggcggcctgaagtctgctgggaaggccaagtttactacg
ccgttcaagctgggcatggcgcctggggaagcaggaaggacacagctgggggcgaaagcg
aaagcagagacgtcggtgcagactcctctccgagtcgatgtacgcgggacgccgtcgtct
tcggccaagggtaaatctgtgtctgtggcgaggaaggagtataagtttttcgatctgaac
ccaaggccggacaggaagacactggcatcatcaggtctccgaccgcagtcgtacactggg
gacgaactggaagacatggggataaacgttgaagaactccgggagatgagccccgccatg
gcaatctactattcgttctattccgcggagctaacaaacgattcggccgagcctcttcaa
ctaggacccgaggccgcctttgtacagctgaaggaactgggctgtaggcttgctacgcag
cagtgggtgacgaatcactatggcctcattctctggaagctcgcaggcatggtctgtctc
gagccggagtcggagctggatccgaagacgaagcgatggtgttggcgggaggtcatgcgg
caattgcgctacagatacgaacgtgagctgaatggtggctcaagaccagcgcttcgtctg
atctcgacggaggacgcaccggcggcttgtcccatggtgctatgcgtgtcgagtatcatc
acctgggcgcctgccgtggtggatagcgagggacgaccggttgaaccccatccagaactg
gaggtgaccgacggatggtatagactacgggccagagtagaccgacccttggccagagcg
gttcgtcggggacttatcaaggttgggacgaagttggccgtctcgggagctaagctgggc
ggggaccgcaaagagtcttgcgaaatcctcgacgcgtacgatagtacctacttggacctt
tcgggcaactctacccacttagcgccatggcacgcaaagcttggctttgccaaggatcct
ttcatcgcgacactggatagcctcaccccggacggcggcagggtacctgccatggacctc
atcgttacaaaggcgtatccaatagcctatctggaatttatcaggaacgaagacgggtcg
acaaccaagctagggccgcgggatgagaaagaagagcttagggcgcaagatgagtggctg
accaggagggatatagctgtagctacaatccgtgccgatctcgagcgacagattcagtca
ctggagaagatctcagagcagctatacggcatcgccggccctcggtttgaggataaggtc
aataaagacgatcctctaccttcttttatcgaaggaatgtacgacgagatgatagaagat
gtgtcacggtcgcctcgggacttcttcgactatctcaactacatggacgcaggttatctg
tacatccacacgctcgatcagatcaggctttcgaaggagcggctcggagaagatatcgag
cgggagcttcagtatatctgccccccacgcaatgtccgagacttccgcgttgttgtcgcc
aaggatgcacggtggtgcaggaaggagcccacgcgaaccgtgcagatcactgtgtgggac
cccatgcgtatggtgttcagcgagggcggttctccgggcgacatccgagagggacaacgc
ttcttggtcgtcaatctcgaggtgaaccagccgagcgcctggatggctcctggcccgggg
tcagtgatttaccttatatcgaagaagagcgcgaggtggacgaacatcaggtcacgcaag
tgctga
DBGET
integrated database retrieval system