Dichomitus squalens: DICSQDRAFT_143277
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Entry
DICSQDRAFT_143277 CDS
T03133
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
dsq
Dichomitus squalens
Pathway
dsq03013
Nucleocytoplasmic transport
dsq03015
mRNA surveillance pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_143277
09122 Translation
03013 Nucleocytoplasmic transport
DICSQDRAFT_143277
03015 mRNA surveillance pathway
DICSQDRAFT_143277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_143277
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_143277
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
DICSQDRAFT_143277
Spliceosome [BR:
dsq03041
]
Common components
Common spliceosomal components
Cap binding complex
DICSQDRAFT_143277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
18836328
NCBI-ProteinID:
XP_007361180
JGI:
143277
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MAHVITPLDQPSNYKDSQSRVDRQTQNELLSKSTTLYVGNLSFYTTEEQIYELFSKCTTP
EDGGGIKRIIMGLDRNTRTPCGFCFVEYYSHAEALACLRYISGTKLDERIIRCDLDLGYR
DGRQFGRGKSGGQVRDEHRQDYDPGRGGWGAQAQRAEIERRREVEERYNDAQDVPGAVAG
GGGDWKDVSENPLKRARSPDDEGESGRGEPRAKMEEQEHDASRM
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgtaatcacccctcttgatcagccttccaactacaaggactcgcagtcccgc
gttgatcgccagacacaaaacgagttgctctccaagtccactaccctttacgtcggcaac
ctgagcttttacaccactgaggaacagatatatgagctcttttcaaagtgcacaacaccc
gaggatggcggtggaatcaaacgtataatcatgggccttgaccgcaatacaaggacaccg
tgtgggttctgctttgttgagtattatagtcatgcggaggcgctagcttgcttgcgatac
atcagcggtaccaagcttgacgagcgcatcatccgttgtgaccttgacctaggctaccga
gatggccggcagtttggcagaggaaagagcggtggtcaggtccgagacgaacacagacaa
gactacgatcctggtcgtggaggatggggcgcgcaagcacagcgggcggagattgaacgt
aggagagaggtggaagagcgttacaacgatgcccaagacgtacctggtgccgttgctgga
ggcggaggggactggaaagatgtctcagagaaccctctcaaacgtgcccgatcgccagac
gacgaaggcgagagcggacgaggggaacctcgcgcaaaaatggaagagcaggaacacgac
gccagtcgcatgtga
DBGET
integrated database retrieval system
