Dichomitus squalens: DICSQDRAFT_144523
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Entry
DICSQDRAFT_144523 CDS
T03133
Name
(RefSeq) DEAD-domain-containing protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03013
Nucleocytoplasmic transport
dsq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DICSQDRAFT_144523
03015 mRNA surveillance pathway
DICSQDRAFT_144523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_144523
Enzymes [BR:
dsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICSQDRAFT_144523
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
DICSQDRAFT_144523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
CMS1
Motif
Other DBs
NCBI-GeneID:
18836430
NCBI-ProteinID:
XP_007362588
JGI:
144523
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MEKDADGFYTPSAAESAPVAAAADPKNDAEDLIKSTFEVSVTLADQQADPNSPLYSAKTF
EELGLHDDLLKGIYDMGFTKPSKIQERALPLLLSNPPQNMIGQSQSGTGKTAAFVLTMLS
RVDYCINKPQALCLAPSRELARQIMSVVVAMGKFTAVQTEYAIKESLPRDAKNVTAHIIV
GTPGTMTDLIRRKVIDVSEVKVFVLDEADNMLDKDGLGEQTLRVKNMLPKNRTVQIVLFS
ATFPDHVRNFANKFAPNANKIELQRNELSVDNIRQFYMDCKNEEHKYEVLVSLYHLLTIG
QSIIFCQHRHTADRISQRMTAEGHKVASLHGAKDATERDAIIDGFREGKNKVLITTNVIA
RGIDIMQVNMVVNYDLPLLNERDNHGSKGDFRPDIETYIHRIGRTGRFGRKGISVNFVHD
KATWQQMEEIERATGKQIIRIETTDLDTMEEQMKKALK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacgccgacggattttacacgccctcagccgcagagtccgcaccggtggcg
gcagccgctgaccccaagaacgatgccgaggatctcatcaagtcgacgtttgaggtctcg
gtcacactcgcggaccagcaagccgatcccaactccccgctctatagcgcgaagaccttt
gaagagctcggattgcacgatgatctcctcaagggcatctacgacatgggtttcacaaag
ccatccaagattcaggagcgcgccctgccgcttctcctttcaaatcctccacagaacatg
attggccaatcgcaatcaggtactgggaagacagctgccttcgttctgaccatgctcagc
cgtgtcgattactgtatcaataagccccaggcactatgtctcgcaccttcccgcgagctt
gcgaggcagatcatgtcggtggttgttgctatgggcaaattcactgctgtgcagaccgag
tacgcgatcaaggagagcttgccgagagacgcgaagaacgtgaccgcgcacatcatcgtc
ggaacccctggaacgatgaccgacctgatcaggcgaaaggtcatcgacgtctccgaggtg
aaggtcttcgtgctcgacgaggcagataacatgctggacaaggacggcctcggcgagcag
acgctccgcgtaaagaacatgctgccgaagaaccgcaccgtgcagatcgtcctcttctcc
gcgacgttcccagaccacgtgcgcaacttcgcgaacaagttcgcgccgaacgcgaacaag
atcgagctgcagcggaacgagctgtcggtcgacaacatccggcagttctacatggactgc
aagaacgaggagcacaagtacgaggtcctcgtctccctctaccacctcttgaccatcggc
cagagcatcatcttctgccaacatcgacacaccgcggaccgcatttcccagcggatgacg
gcagaagggcacaaagtcgcatcgctgcacggcgcgaaggacgcgacggagcgcgacgcg
atcatcgacgggttccgcgagggcaaaaacaaggtgctgatcacgacgaacgtcatcgcg
cgcggcatcgacatcatgcaggtcaacatggtcgtcaactacgaccttccgctcctgaac
gagcgcgacaaccacggcagcaagggcgacttccggcccgacatcgagacgtacatccac
cgtatcgggcgcaccggtcggttcgggcgcaagggtatttcggtcaacttcgtgcacgac
aaggcgacgtggcagcagatggaggagatcgagcgtgctacaggcaagcaaatcatccgg
atcgagaccacggacctggacacgatggaggagcaaatgaagaaggcgttgaagtag
DBGET
integrated database retrieval system
