Dichomitus squalens: DICSQDRAFT_144900
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Entry
DICSQDRAFT_144900 CDS
T03133
Name
(RefSeq) WD40 repeat-like protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_144900
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
DICSQDRAFT_144900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
KNTC1_N
Beta-prop_Vps41
WDR54
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
CFAP43_N
RAB3GAP2_N
Beta-prop_LRRK2
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
DUF1192
Motif
Other DBs
NCBI-GeneID:
18836462
NCBI-ProteinID:
XP_007363032
JGI:
144900
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MHLNEAILCATAPSASGSGPGTLSLHDIQTGTSLASWKQSSSSTHCTAVVQSRDGQGGYM
LAAQQDKSIMNVYNFQKDQLALKIVLPEKLSAIAVDPRGKYCAGATAQGRIFLWETASGI
MYNSWDAHYRQINVLRFTHDAAALIAGSEDSGVSIWSIPRLLDDTLQNELPTPYCNLTDH
TLPVTDIVCGVGFFPSCRILTASIDHTVKLWDSASKSLLTTFYFPQPISCVAWDVSERLF
FAASADGSVHQVNLFRQREDRFSRAAMEAVGGAGVGDVIRINDTDPAAARKRLISVGEAV
TTLAISLTSSMLLAGTATGLVHIYDIASHQLLRTLSSHKGMQITYLATMLRPPDLIGHVS
LSLTASGAGDAKESIPARPVAPFQRIRDAKTREAHEVSLFLPQVQATTSASFGYSRQELI
KDHAYFVKPSAVGPEATGVSLQTRVTELEGEVARLKEQLGKARGINDVMWETVVQRLVAE
GKEKKPESGVSIDEDGAEQSEGGRRRKRNRT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgaacgaggccattctctgcgcgaccgcaccgtccgcttctggctctggacct
ggcacgctctctctccatgacatccagaccggaacctccctcgcctcgtggaagcagtct
tcatcaagcacacattgcacagcagtcgtgcagtcgagggatgggcaaggcggctatatg
ctcgctgctcagcaggacaaatctatcatgaatgtatataacttccaaaaagaccagctt
gctctgaagattgtgctgcccgaaaagctctcggcgatagcggtcgacccgagggggaag
tactgtgcaggggcaactgcccaaggccggatatttctctgggagaccgcgtccgggatc
atgtacaattcgtgggacgctcattaccgtcagataaacgtcctccgcttcacccacgat
gccgccgcgctcattgccggcagcgaggactcgggtgtgagcatatggtcaataccgagg
cttctggacgacaccctccagaatgagctcccgaccccttactgtaacttgaccgaccac
acgctccccgtcacggacatcgtctgcggggtcggcttcttcccctcctgccgcatcctc
acggcttcgatagaccatacggtcaagctctgggactcggcctccaaatccctccttacg
acgttctacttcccccaacccatctcatgtgtcgcctgggacgtctccgaacggctgttc
ttcgcggcgtccgcggacgggtccgtacatcaagtcaacctcttccgtcagcgggaagac
aggttcagccgcgcggccatggaggccgtcggcggcgcgggcgtgggcgatgtcatccgg
atcaacgacaccgaccccgctgcggcgcgcaaacgcctcatttccgtaggggaagcggtc
acgacgctcgcgatctccctcacctcgtccatgctcctcgcgggcaccgcgacgggcctc
gttcatatctacgacattgcgtcgcaccagctgctccgcacgctctcgtcgcacaagggt
atgcagatcacgtatctggcgacgatgctgcgcccgccggacctcattggccatgttagc
ctctcgctcacggctagtggggcgggcgacgcgaaggagagcatcccggcgcgccctgtg
gcgccgttccagcgcattcgtgatgcgaagacgcgggaggcgcatgaagtgtcgttgttc
ctgccgcaagttcaggcaacgacgagtgcatcttttggatactcaagacaggaactcatc
aaagaccacgcatacttcgtcaaaccttctgcggtaggcccggaagctacaggcgtgtca
ttacagacgcgggtgacagagcttgagggcgaagttgctcgtctgaaagagcagctgggc
aaggcaaggggtataaacgacgtgatgtgggaaaccgtcgtccagcggcttgttgcagag
ggcaaggagaaaaagccggaaagcggcgtgtcgatagacgaggatggagcagagcagagc
gagggtggacggagacgaaagcgcaatcgcacatga
DBGET
integrated database retrieval system