KEGG   Dichomitus squalens: DICSQDRAFT_144900
Entry
DICSQDRAFT_144900 CDS       T03133                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
dsq  Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dsq03009]
    DICSQDRAFT_144900
Ribosome biogenesis [BR:dsq03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    DICSQDRAFT_144900
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WD40 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_EML KNTC1_N Beta-prop_Vps41 WDR54 WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 CFAP43_N RAB3GAP2_N Beta-prop_LRRK2 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st DUF1192
Other DBs
NCBI-GeneID: 18836462
NCBI-ProteinID: XP_007363032
JGI: 144900
LinkDB
Position
Unknown
AA seq 511 aa
MHLNEAILCATAPSASGSGPGTLSLHDIQTGTSLASWKQSSSSTHCTAVVQSRDGQGGYM
LAAQQDKSIMNVYNFQKDQLALKIVLPEKLSAIAVDPRGKYCAGATAQGRIFLWETASGI
MYNSWDAHYRQINVLRFTHDAAALIAGSEDSGVSIWSIPRLLDDTLQNELPTPYCNLTDH
TLPVTDIVCGVGFFPSCRILTASIDHTVKLWDSASKSLLTTFYFPQPISCVAWDVSERLF
FAASADGSVHQVNLFRQREDRFSRAAMEAVGGAGVGDVIRINDTDPAAARKRLISVGEAV
TTLAISLTSSMLLAGTATGLVHIYDIASHQLLRTLSSHKGMQITYLATMLRPPDLIGHVS
LSLTASGAGDAKESIPARPVAPFQRIRDAKTREAHEVSLFLPQVQATTSASFGYSRQELI
KDHAYFVKPSAVGPEATGVSLQTRVTELEGEVARLKEQLGKARGINDVMWETVVQRLVAE
GKEKKPESGVSIDEDGAEQSEGGRRRKRNRT
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgcacctgaacgaggccattctctgcgcgaccgcaccgtccgcttctggctctggacct
ggcacgctctctctccatgacatccagaccggaacctccctcgcctcgtggaagcagtct
tcatcaagcacacattgcacagcagtcgtgcagtcgagggatgggcaaggcggctatatg
ctcgctgctcagcaggacaaatctatcatgaatgtatataacttccaaaaagaccagctt
gctctgaagattgtgctgcccgaaaagctctcggcgatagcggtcgacccgagggggaag
tactgtgcaggggcaactgcccaaggccggatatttctctgggagaccgcgtccgggatc
atgtacaattcgtgggacgctcattaccgtcagataaacgtcctccgcttcacccacgat
gccgccgcgctcattgccggcagcgaggactcgggtgtgagcatatggtcaataccgagg
cttctggacgacaccctccagaatgagctcccgaccccttactgtaacttgaccgaccac
acgctccccgtcacggacatcgtctgcggggtcggcttcttcccctcctgccgcatcctc
acggcttcgatagaccatacggtcaagctctgggactcggcctccaaatccctccttacg
acgttctacttcccccaacccatctcatgtgtcgcctgggacgtctccgaacggctgttc
ttcgcggcgtccgcggacgggtccgtacatcaagtcaacctcttccgtcagcgggaagac
aggttcagccgcgcggccatggaggccgtcggcggcgcgggcgtgggcgatgtcatccgg
atcaacgacaccgaccccgctgcggcgcgcaaacgcctcatttccgtaggggaagcggtc
acgacgctcgcgatctccctcacctcgtccatgctcctcgcgggcaccgcgacgggcctc
gttcatatctacgacattgcgtcgcaccagctgctccgcacgctctcgtcgcacaagggt
atgcagatcacgtatctggcgacgatgctgcgcccgccggacctcattggccatgttagc
ctctcgctcacggctagtggggcgggcgacgcgaaggagagcatcccggcgcgccctgtg
gcgccgttccagcgcattcgtgatgcgaagacgcgggaggcgcatgaagtgtcgttgttc
ctgccgcaagttcaggcaacgacgagtgcatcttttggatactcaagacaggaactcatc
aaagaccacgcatacttcgtcaaaccttctgcggtaggcccggaagctacaggcgtgtca
ttacagacgcgggtgacagagcttgagggcgaagttgctcgtctgaaagagcagctgggc
aaggcaaggggtataaacgacgtgatgtgggaaaccgtcgtccagcggcttgttgcagag
ggcaaggagaaaaagccggaaagcggcgtgtcgatagacgaggatggagcagagcagagc
gagggtggacggagacgaaagcgcaatcgcacatga

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