Dichomitus squalens: DICSQDRAFT_146045
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Entry
DICSQDRAFT_146045 CDS
T03133
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12897
transformer-2 protein
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_146045
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsq01009
]
DICSQDRAFT_146045
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_146045
Protein phosphatases and associated proteins [BR:
dsq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DICSQDRAFT_146045
Spliceosome [BR:
dsq03041
]
Common components
Common spliceosomal components
SR proteins
DICSQDRAFT_146045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
18836554
NCBI-ProteinID:
XP_007364416
JGI:
146045
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MYSDSAPAADPYNEAYSTEPPPPTAGPTADSRDRDLPPARGRSRSRSPQRSSSYRKSPPP
RRPPHAPIQAPNPSNVLGVFGLSIRTTERDLDDEFSRFGRVEKVVIVYDQRSDRSRGFGF
ITMSTTEEATRCIKELNGVELNGRRIRVDYSVTDRPHAPTPGEYMGHRRRRGRDSYSGRD
NDRYDDRDRRDRDPYRSRYDRDERDRDHYGRDNRDWRDRRSPPPRSRYSPEYRRRRSYSR
SPPRGSSPTRARDYDAPSSSALPANGNGDSRW
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtactccgactctgctcccgccgccgacccttacaacgaagcgtacagtacggagcca
ccgccgcccacggccgggcctaccgccgattcgcgcgaccgagaccttcctcctgcgaga
gggcgttcccgttctcggagtcctcaacggtcctcgagctaccgcaagtcgccgcctcct
cgccgcccgccgcacgcgcccattcaggcgcccaatccctccaacgtgttgggggtcttc
ggattgagcatccgcactaccgagcgtgatctagacgacgagttcagccggtttggtcgc
gttgaaaaggtggtgattgtgtacgaccagaggtcagaccgttcgcgtggttttgggttc
atcactatgtccaccacagaagaggccacccgttgtatcaaggagcttaacggtgtggaa
ctgaatggccgacgtattcgtgttgactattcggtcactgatcgcccacacgcccccacc
cccggggagtacatgggtcacagacgtcgtcgaggccgcgactcctactctggccgggat
aatgatcgctacgatgacagagaccgtcgtgaccgtgacccgtacaggagccgttacgac
cgcgacgagcgggaccgtgatcactacggcagggacaacagggattggcgtgatcgccgc
agcccacctcctcggtcgcgctactcaccggagtatagaaggcgcaggagctactcgagg
agccccccgaggggcagtagccccactcgcgctcgggattatgacgctccgtcttccagc
gctctgcctgctaatggcaacggggactctcgctggtga
DBGET
integrated database retrieval system
