Dichomitus squalens: DICSQDRAFT_146507
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Entry
DICSQDRAFT_146507 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dsq
Dichomitus squalens
Pathway
dsq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DICSQDRAFT_146507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_146507
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_146507
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DICSQDRAFT_146507
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DICSQDRAFT_146507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
18836591
NCBI-ProteinID:
XP_007364944
JGI:
146507
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MFGSGAVQSTWGQPQQNQQQPQQQPSAFGQPSAFGSGGAFGSTSAFGQPQNQQQQQPQAN
PMFGGLGGNNTTGTTSTGFGGGGAFGASNASTSGGLFGQSKPATGFGAFGGGTGAFGATT
GTPSAFGSAAGTGAFGQPTTGTTGTGTGIFGQPSTSTGAFGGGGVFGQNKPATGAFGATP
STNTDGGVPVTTGTANTPFTAFAEKDSVNPGTTLQYQSITSMPQYRSASFEELRVQDYQQ
GRKTAGAFGQSSFGAPAAQPQPSTGLFGQPAPQQPAATGTTFGGFGNTSTTQPASTGFGA
FSQPANTAGTTGTSTGLFGAGGAFGQQNPQQQQQQPSTGFGTFGQPANQQQPQAGGGLFG
AGGAFGANNQQKPAFGATGTGAFGSTTGTFGQPQQQPQTGGGLFGQTQPQQTGTTGTFGG
FGQQNKPSIFGSTNTAGTGTGFGAFGTNTQQQQPQQQPSQQQPGGLFGGGGGGLFGQNNQ
QQQQQQPQQGGGLFGASTTQPQTGGGLFGGGGGGLFGTNQQQQQQQGAQPQQQNTFGNLF
NKPATTTNTGSGLFGGGGGFGTNLGQPAQNQSAAGGGLFGGSTLGQQPQNQQANTGFGGG
LFGGAKPAPTLGTSTSIGQQQPGLGNSLFGGSTLGASNATMGVSVLGQSQAPLTASIAQP
IASNLPIFSMLPPGPRAVTLDQQPKKKPGYFVDVPTRAPVPQLQLRYAPASTKLRGFSST
STLPGAGSSQLGGSSLLLSGKPNALSLSKSSPNVLSPDSFLTNGGASPTLGSGGRQSVKK
LTLDKRVEPADLFSKSTAGAGGGPAFNAKLSIAARESEAAAAPRVESPTPKQKNQSRFGA
SETPASPTKAPKDPSELQEGDYWVKPPLETLKSLGHDELMAFPGLIVGRVGYGQITFLEP
VDLTGLPRLSSLLGEVVRFDDKECSVYPDADEAEKPPPGSGLNVKARLELVRCWALDKAT
REPIKDESHPSAVRHLKRLKGMKHTTFEGFDIQEGKWTFTVDHF
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcaggtgccgtccagtctacctggggccagcctcagcagaatcagcaacaa
ccgcagcagcagccctcagcgtttggccagccctccgcgttcgggtccggcggtgccttc
ggctcgaccagcgcgttcggtcaaccacagaaccaacagcagcagcagcctcaggcgaac
cccatgttcggaggccttggcggaaataacacgacggggacgaccagtacgggattcggt
ggcgggggtgccttcggagctagtaacgcgtcaacaagcgggggtctgttcggtcagtcc
aaaccagcaacggggttcggtgcgtttggaggaggcactggagcgttcggggctacgact
gggacgccgtcggcgtttgggagcgcggctggtaccggcgcgtttgggcagccaactacc
gggacaacggggacaggcactgggatcttcggtcaaccctcgacaagcacaggtgctttt
ggcggcggcggggtctttggacagaataaaccagcgacgggggcgttcggcgccactcct
agtacgaacacggacggtggtgttccagtaaccactggaacggcaaatacaccgttcact
gcgttcgcggagaaggatagcgtcaaccctgggactaccttgcaataccagagcatcacg
tcgatgcctcagtaccgctcggcgtcattcgaagaattgcgagtccaagactaccagcaa
ggtcggaaaacagcaggagccttcgggcagtcgtcgttcggtgcgcctgctgcccagccc
cagccttccacaggtctctttggccagcccgcaccacaacaacccgcggcaaccggaacg
acttttggtggctttggtaacacgagcactacccaaccagcgtcgacagggtttggtgcg
tttagccagcctgccaacacggcaggaacaacggggactagtacaggcctttttggtgct
ggcggcgctttcggccagcagaatccacagcagcagcagcagcaaccgtcaactggcttt
ggtacattcggacagcctgcgaaccaacagcagccacaggcaggcggagggctgttcggc
gccggcggcgcgttcggggcgaacaatcagcagaagcccgccttcggcgcgactggcacc
ggcgcgtttggttcgacgacgggcacgttcggacaaccgcagcagcagccacaaaccggt
ggtggtctgttcggtcaaacccaacctcaacagaccggtacgactggcacgtttggtggt
ttcggtcaacaaaacaagccttcgatcttcggaagcaccaacacagctggcactggcact
ggttttggtgcctttgggacgaacacccagcagcagcaaccgcagcagcaaccaagccag
cagcagcctggcgggcttttcggtggtggcggcggagggttgttcggccagaacaaccag
cagcaacaacagcagcaacctcaacagggcggtggtctatttggtgcatcgaccactcag
ccacaaacaggcggaggtctctttggtggcggtggaggcggcctatttggtaccaaccag
cagcaacagcaacagcagggagcccaaccacagcaacagaacacctttggtaacctgttt
aacaaacccgctacaaccacgaacacaggcagtggtttattcggtggcggcggtggattc
ggaacaaatttgggtcaacccgcccagaatcagtctgcggcgggaggtggtctcttcggc
ggctccactctcggacagcagccccagaatcagcaggcgaatactgggttcggaggcggc
ctattcggtggcgcgaagccagcaccgacactgggcacgtcaacctcaataggtcagcag
cagcctgggctcggaaactcgttgttcggcggcagcactcttggcgcgtccaatgccact
atgggcgtctccgttcttggccagtcacaagcacccttgaccgcatccatcgcacaaccc
attgcctccaacctccccatcttcagcatgctccctcccggtccccgcgccgtgacactc
gaccagcagcccaagaagaagcctggttatttcgtcgacgttcccacgcgcgcgcccgtc
cctcagctccagctccgctacgcccccgcctcaaccaagcttcgcggcttcagctcaaca
tctacgctccctggggcaggctcgagccagttgggtggcagcagcctactcctgtccggc
aaacccaacgcgctctcgctcagcaagagctccccaaacgtactcagcccggactcgttc
ctcaccaacggtggcgctagcccgaccctcggcagcggtgggcgccagagcgtcaagaag
ctcacgctcgacaagagagtcgagcccgcggacctgttcagcaagtccaccgcaggagcg
ggcggcgggcctgcgttcaacgcgaagcttagcatcgccgcgcgcgaatctgaggccgcc
gcggccccccgcgttgagtcgcccactccgaaacagaagaaccagagtaggttcggggcg
agcgagacccctgcatctcccacgaaggcccccaaggacccatccgagcttcaggagggc
gattactgggtgaagccaccgctggagacgctgaagtcgcttgggcacgacgagctcatg
gcgttccccggactcatagtcggacgtgtcggctatggtcagatcacgttcctcgagccg
gtcgatctcacgggtctcccgcggctgtcgagcctgctcggggaggtcgtccggttcgac
gacaaggagtgcagcgtttacccggacgcggacgaggcagagaagcccccgcccgggagc
gggctgaacgtgaaggcgaggctcgagctcgtcaggtgttgggcgctggacaaggcgaca
cgggagccgatcaaggatgaaagtcatccgagcgctgtgaggcacttgaaaaggctgaag
gggatgaagcatacaacgttcgaggggttcgatatccaggagggcaagtggacgtttacc
gtcgatcacttctag
DBGET
integrated database retrieval system