Dichomitus squalens: DICSQDRAFT_146511
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Entry
DICSQDRAFT_146511 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
dsq
Dichomitus squalens
Pathway
dsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICSQDRAFT_146511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_146511
03016 Transfer RNA biogenesis [BR:
dsq03016
]
DICSQDRAFT_146511
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
DICSQDRAFT_146511
Transfer RNA biogenesis [BR:
dsq03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
DICSQDRAFT_146511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_3
AIR2-like_ZnK4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
18836592
NCBI-ProteinID:
XP_007364949
JGI:
146511
UniProt:
R7T2X9
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MASREIIDLTEPEVIELDSDGEEVDARPSANGSPLAQTTQADDLPQQGQTKKKRRKKKRK
ASAAAQPYQDEQAGTTTTSAEVSRPQSPDRQDEPEITEVDMEPGQIQGAKSSHSQNRSLA
ERLSGPAEGSSRSAANGEGRRRGQKDGETKPDAERGKEREKDRKRERERRRRSRSPQRDR
DRVRDRNRDARRRSRSRERDGEKRSRDKASERNAPLFFEDVTPAEVPAAAKLLDGVAGPS
RQSGEARSNTLSSTESQAANVLLLPTHVSVAEGAEAEALELGPLAVPTPEVGSDEEDYID
YLDYDDNLKAEVAKASKPARIVCKKCGAEGEHKTYECTVLICLICGARNEHPTRSCPISK
VCFTCGMKGHINKVCRRVHQTPSHCDRCGARTHQTNECPTLWRLYKYVEDEDRQEILRVR
ETKRVLAFGEGGEGYIATDEWCYNCGECGHLGDDCKTVAHPFDMPHEPSAFSLYNILSGP
FSSEALRSSKRAPRDWETASAFADGHGATLPTDVGRQGRRKERERLGKAQLLQDAEDEED
DWFGSAHSRARSDARASREGGRNGGRGKAEGKVKFNFSSGASFGGGEKEGKRQRTSYNDL
PGPSRETDTLQIRGASRKQSYSSTSSKDCHDRHTRDRNRNRYEEMRESQRGPRYRGGYR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcgagagatcatcgatctcaccgaaccagaagtcatcgaactcgactcggac
ggagaagaggttgatgcacgtccatccgcgaacggctccccgttggcccagacaacacaa
gcagatgacctaccgcagcaaggacagacgaagaagaagcggaggaagaagaagcgcaag
gcaagcgcggccgcgcaaccttaccaggacgaacaagccggcactaccactacctctgct
gaagtttcccgcccacaatcacccgaccggcaagacgagccagagatcactgaggtggat
atggaacccggacagatccaaggagcgaagagctcgcactcacagaaccgcagtctcgcg
gagcgactttcgggacctgcggaggggagttcgcggagcgctgctaacggcgaggggcgg
aggcgggggcagaaggacggggagacgaaacctgatgcagagcgagggaaagaacgcgaa
aaggacaggaaacgggagcgggagcggcggaggaggagtaggtcaccacagcgagaccga
gaccgagttcgggaccggaaccgcgacgcacgcaggcgatctcgctcgagagagcgcgac
ggcgaaaagcggtcgcgcgacaaggcatccgagcgcaacgctcctctcttcttcgaagac
gttactcctgctgaagtgcccgcagccgccaagctgctggatggcgtcgcgggtccctcg
agacaatccggagaggccagatcgaacacgctctcttcaaccgaatcccaggccgccaac
gtcctcctccttccaacacatgtatctgtcgctgaaggagcggaggcagaggcgttggag
ctgggtccgttggctgtaccgacacctgaggtcggttcggacgaggaggattacattgac
tacctcgattacgacgacaatcttaaggcggaagtagcgaaagcttctaaaccagctcgc
atcgtctgcaagaaatgtggtgccgaaggcgagcataagacttacgagtgtaccgtcctt
atctgtctaatttgcggagcgcgtaatgaacatccgacacggagctgtccgattagcaag
gtgtgcttcacttgtggtatgaaaggtcacatcaacaaggtatgcaggcgggtacatcag
acaccgagccactgtgatcggtgcggggcgcggacccatcaaaccaacgaatgtccgacc
ctgtggcgtttgtacaagtacgttgaggacgaggatcgccaagaaatccttcgcgtgcgc
gaaacgaaacgtgtgcttgctttcggcgagggcggcgagggttatattgctaccgacgaa
tggtgctacaactgtggcgaatgcggtcatctcggcgatgattgtaaaaccgtcgcccat
cctttcgacatgcctcatgagccgtccgcatttagcttgtacaacatcttgtccggaccg
ttctcatcggaggcactgaggtcttcgaaacgcgctccacgggattgggagactgcttcc
gcgttcgcagacgggcacggcgccacactccccacggacgttggcaggcagggtcgtcgc
aaagagcgtgaacgtctcggcaaagcacagctgcttcaggacgcagaagacgaagaagat
gactggttcggcagcgcgcactcaagagctcgcagtgacgcccgagcaagtcgggaaggc
ggccgtaacggtggtaggggaaaggcagaagggaaggtcaagttcaacttctcttccggc
gcatcgtttggtggcggagagaaggagggaaaacgccagcggacgtcatataacgaccta
cccggaccatctagggagacggataccctccagattcgtggcgcgtcacggaagcagagc
tatagttcgacatcttcaaaagattgccatgatcgccatacgcgcgatcgtaaccgtaac
cgatacgaggagatgcgagagtctcagcgagggccacgttatcgcggagggtatcgatga
DBGET
integrated database retrieval system
