Dichomitus squalens: DICSQDRAFT_148010
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Entry
DICSQDRAFT_148010 CDS
T03133
Name
(RefSeq) LSM-domain-containing protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
dsq
Dichomitus squalens
Pathway
dsq03018
RNA degradation
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_148010
09123 Folding, sorting and degradation
03018 RNA degradation
DICSQDRAFT_148010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_148010
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_148010
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DICSQDRAFT_148010
mRNA degradation factors
5'-3' decay
Lsm complex
DICSQDRAFT_148010
Spliceosome [BR:
dsq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
DICSQDRAFT_148010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
18836710
NCBI-ProteinID:
XP_007367052
JGI:
148010
UniProt:
R7SVY5
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MDKPKREAILDLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQENLQGLPEGQP
TTRNLGLVVLRGPTITLLSPVDGYEEIANLTNSQHQ
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccgaagcgtgaggccatcttagacctcgctaaatacgtgaacgaacgcatt
cgggtcaagttcactggcggacgggaagtgaccggagtgctcaagggctatgaccagcta
ctcaacctcgtgcttgatgaagtacaagaaaatttgcaaggcctccctgagggccaaccg
acgacacgcaatctaggtctcgttgtcctcagaggcccaacgatcacgctcttgagtcct
gtagacggctatgaagaaatcgcgaacctaacaaatagtcaacaccagtaa
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