KEGG   Dichomitus squalens: DICSQDRAFT_148010
Entry
DICSQDRAFT_148010 CDS       T03133                                 
Name
(RefSeq) LSM-domain-containing protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
dsq  Dichomitus squalens
Pathway
dsq03018  RNA degradation
dsq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DICSQDRAFT_148010
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DICSQDRAFT_148010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsq03019]
    DICSQDRAFT_148010
   03041 Spliceosome [BR:dsq03041]
    DICSQDRAFT_148010
Messenger RNA biogenesis [BR:dsq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     DICSQDRAFT_148010
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     DICSQDRAFT_148010
Spliceosome [BR:dsq03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    DICSQDRAFT_148010
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 18836710
NCBI-ProteinID: XP_007367052
JGI: 148010
UniProt: R7SVY5
LinkDB
Position
Unknown
AA seq 96 aa
MDKPKREAILDLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQENLQGLPEGQP
TTRNLGLVVLRGPTITLLSPVDGYEEIANLTNSQHQ
NT seq 291 nt   +upstreamnt  +downstreamnt
atggataaaccgaagcgtgaggccatcttagacctcgctaaatacgtgaacgaacgcatt
cgggtcaagttcactggcggacgggaagtgaccggagtgctcaagggctatgaccagcta
ctcaacctcgtgcttgatgaagtacaagaaaatttgcaaggcctccctgagggccaaccg
acgacacgcaatctaggtctcgttgtcctcagaggcccaacgatcacgctcttgagtcct
gtagacggctatgaagaaatcgcgaacctaacaaatagtcaacaccagtaa

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