Dichomitus squalens: DICSQDRAFT_151965
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Entry
DICSQDRAFT_151965 CDS
T03133
Name
(RefSeq) RNA-binding domain-containing protein
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_151965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_151965
03110 Chaperones and folding catalysts [BR:
dsq03110
]
DICSQDRAFT_151965
Enzymes [BR:
dsq01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
DICSQDRAFT_151965
Spliceosome [BR:
dsq03041
]
Complex B
Other components
Prp19-related factors
DICSQDRAFT_151965
Complex C
DICSQDRAFT_151965
Chaperones and folding catalysts [BR:
dsq03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
DICSQDRAFT_151965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_Nup35
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
18837080
NCBI-ProteinID:
XP_007361205
JGI:
151965
LinkDB
All DBs
Position
Unknown
AA seq
151 aa
AA seq
DB search
MEEGTKTKKTIFVGGIGDDVDEAVLLDNFATFGDVIEVQLPPAPTNPSHPNETKHRGFAF
VTYASPADAQDAIDNMDLNELNGRVLRVNLARPMKGPTQAPGNRAIWESEDWLRQHAKPL
SQSGGAPLRGQGKGGSEEPAEGQGEDEAMEE
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggcaccaagaccaagaaaaccatcttcgtcggcggaatcggcgacgacgtc
gacgaggctgtcctcctcgacaacttcgccaccttcggcgatgtaatcgaagtacagcta
ccgcccgctccaactaatccctcccatcctaatgaaacgaagcaccgaggtttcgcgttc
gttacgtatgcctctccagcggacgcccaagacgccattgacaatatggacctcaacgag
ctcaatggccgggtgctgagagtgaacctcgcgcgccccatgaagggcccgacacaagct
cctggaaacagagcaatctgggagtctgaggattggcttcgccaacatgccaagccgcta
tcacaaagtggcggtgcccccttacgcggccaaggcaagggaggctctgaggagcccgca
gaaggtcaaggggaagacgaggcgatggaggaatga
DBGET
integrated database retrieval system
