Dichomitus squalens: DICSQDRAFT_152426
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Entry
DICSQDRAFT_152426 CDS
T03133
Name
(RefSeq) structural maintenance of chromosome protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
dsq
Dichomitus squalens
Pathway
dsq04111
Cell cycle - yeast
dsq04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
DICSQDRAFT_152426
04113 Meiosis - yeast
DICSQDRAFT_152426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_152426
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dsq00535
]
DICSQDRAFT_152426
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
DICSQDRAFT_152426
Meiosis-specific proteins
Cohesin complex and associated proteins
DICSQDRAFT_152426
Proteoglycans [BR:
dsq00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
DICSQDRAFT_152426
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
CALCOCO1
Tropomyosin
CENP-F_leu_zip
AAA_29
ABC_tran
FtsK_SpoIIIE
FKBP15
Motif
Other DBs
NCBI-GeneID:
18837136
NCBI-ProteinID:
XP_007361786
JGI:
152426
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MYIKTLTIQGFKSYRDQTQIEPFSPRHNVVVGRNGSGKSNFFAAIRFVLSDAYTSMSREE
RQALLHEGVSTTQTLSAFVEIVFDNSDNRFPTGREEVILRRTIGLKKDEYSLDKKSASKA
DVMNLLESAGFSKSNPYYIVPQGRITALTNAKDHERLALLKEVAGTKVYEQRRTESLRIM
AETDSKRAKIGELLEYIDTRLNELEEEKEELKEFQEKDKERRCLEYALYQRELEEVGAAL
EEIEEERRGELHSANIRREQYTDREKQVQNLERSIAQLRTTVTTLNLTRQGTQSELTDLI
RARTELECTIADLQLAAQRAGGRRTVLEDELAAVEATIAAKEAELTALAPEWERVRAAES
AERRLLDEARARLEALYAKRGRLDKFRTKAERDKYLRAEIASMQQFRRTQAAALSGLEQE
LTSARQSFEEVNRSIDDTQAKAEDARNQVRELGEQIARLKDEQAEKTERRKELWREDSKL
ESLVTHAAEELRGAERTLASMMDKDTGNGLRSIDRIVAHMPNFEGVYGPLYRLFEITDDK
FNIAVELTAGNSLFHVVVDTDDTASRLVKIMMQEKNGRITFMPLNRLKPKVPPSPNAQDA
IPLLDKLRFDPKHAKAFQQVFGKTCVCRDLTIAAAYVKSHGINTITLDGDKVDRKGALTG
GYHDVRRSRIDAIRNVTTWRAKHAEHDARLLEVKATIAALEQEITRGTGELQKLAARQAQ
ARAVRENVAEEVATLGKEKERHAARVARLEGEIEELRSELSGLDARIEGFQTELRSPMAQ
NLTGEEEDLIETLGREVEQRQRNLVELGKQKNQVGGSKNILEIELNEGLVRRREELRLKI
EGLGASEAGDTDSEDALESKTRERKALNNSIESLQKKIQETEKELEKTSTQLQEQRQKLE
SIQSQQAEDVRGISKQQKNTERYLAKRQMLLNRKDDCNRNIRDLGVLPEEAFEKYTNEKV
DRLMKKLHNVNEGLKKFAHVNKKAFEQYNNFTKQRDQLIQRREDLDKSAESIEELVEVLD
QRKDEAIERTFKQVASNFEEVFEKLVPAGRGRLVIQRRIDQDEEDAEEADETQQSTIDNY
TGVSIRVSFNSKVDEGLRIQQLSGGQKSLVALATVFAIQKCDPAPFYLFDEIDANLDAQY
RTAVAAMIHDLSATAQFITTTFRPEMLNTADKFYGVLFNNQKVSTIRSIRREEAMEFVEQ
EAQAQ
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagaccttgaccatccaaggcttcaagtcctaccgggaccagacccagata
gagcctttctcaccaagacataatgtcgtcgtcggccgcaatggttcaggcaagagtaac
ttcttcgcagccatccggttcgttctctccgatgcctacacctccatgtcgcgagaggag
aggcaagcccttctccatgaaggtgtctcaacaacccagactctctctgccttcgtggaa
atagtgtttgataactcggacaaccgtttccccactggtcgggaagaagtcatcctccgg
cgtactatcggtctcaagaaggacgaatacagtctggacaagaagagtgcaagcaaggcc
gacgtgatgaacctcctcgaaagtgcaggtttcagcaagagcaacccctactatatcgtc
ccacaaggtcgaattacagcactcaccaacgcaaaggaccacgaacgtctcgcgcttcta
aaagaggtcgcaggcacgaaggtctacgagcagcgccgcaccgagtccctgcgcatcatg
gccgagacagactccaagcgagccaagatcggcgagcttctcgaatacatcgacacccgg
ctgaacgagctggaagaggagaaggaggagctcaaggagttccaagagaaggacaaggag
cgccgctgcctcgagtacgccctgtaccagcgcgagctcgaagaggtcggcgcagctctg
gaggagatcgaggaggagcgcaggggcgagctgcacagcgccaacatccgccgcgagcag
tacaccgaccgcgagaagcaagtgcagaatctcgaacgctccatcgcgcagctccgcacg
acggttaccaccctcaacctcacccgccaaggcacccaatccgaactcaccgacctcatt
cgggcccgcaccgagctcgagtgcacgatcgcggacctacagctcgccgcccagcgggca
ggcgggcggcgcaccgtgctcgaggacgagctcgccgccgtagaggcgaccatcgccgcc
aaggaggccgagctcaccgcgctcgcgccggagtgggagcgcgtccgtgcggcggagagc
gcggagcgacggctgctcgacgaggcgcgggcgcgcctggaggccctgtacgcgaagcgt
ggtaggctggacaagttccgcacgaaggcggagcgcgacaaatatctgagggccgagatt
gcgagcatgcagcagttccggagaacgcaggcggcggcgctctcggggcttgagcaggag
ctaacgagcgcgaggcagtcgttcgaggaggtgaacaggagcatcgacgacacgcaggcg
aaggcggaggacgcgaggaatcaggtgcgcgagctgggggagcagattgcgaggctcaag
gatgagcaggcggagaagacggagcggaggaaggagctgtggcgggaggactcgaagctg
gagtcgctcgtgacgcatgcggcggaagagctgcgaggggcggaaaggacacttgcgagt
atgatggacaaggacaccggcaatggcctgcgttccattgaccgcattgtcgcgcatatg
ccgaattttgaaggtgtctacggacccttgtatcgtctgtttgagatcacagacgacaag
ttcaacatcgccgtcgagctcaccgcaggcaatagcttgttccacgttgttgtcgatacc
gacgacacggcctcacgtttggtcaagatcatgatgcaagagaagaatggccggatcacc
ttcatgcccctcaaccgcctcaaacccaaagtcccgccctcgccaaacgcgcaagacgcg
atcccgctcctcgacaagctccgcttcgaccccaagcacgccaaggccttccagcaagtg
ttcggcaagacctgcgtctgccgcgacctcaccatcgccgcggcgtacgtgaagtcgcac
gggatcaacaccatcaccctcgacggcgacaaggtcgaccgcaagggcgcgcttaccggc
ggctaccacgacgtccgccgctcgcgcatcgacgcgatccgcaacgtcaccacctggcgc
gccaagcacgcggagcatgacgcacgcctgctcgaggtcaaggccacgatcgcggcactc
gagcaggaaatcacgaggggcacgggcgagctgcagaagctcgccgcgcggcaggcccag
gcgcgcgcggtgcgcgagaacgtcgcggaggaggtcgcgacgcttgggaaggagaaggag
cgccacgcggcacgggtcgcgcggttggagggggagattgaggagctgaggtctgagctg
agcggtttggacgcgaggatcgagggcttccagacggagctgcggagcccgatggcgcag
aacttgacgggcgaggaggaggacctgatcgagacgcttgggcgggaggtcgagcagcgc
cagagaaacctggtcgagctcgggaagcagaagaaccaggttggaggcagcaagaacatc
ctcgagatagagctgaatgagggcttggttcggcgtcgtgaagaactgcggctcaagatc
gagggtctcggcgcgtcggaagctggtgatacagactctgaagacgccttggaatccaag
actcgtgagcgcaaggcgctcaacaactctatcgagtccttgcagaagaagattcaagaa
accgagaaggagcttgaaaaaactagtacccaacttcaggagcagcgccaaaaactggag
tcgattcagagccaacaggccgaggacgtccgtgggatctccaagcagcagaagaacacc
gagcggtatttagcgaagcgtcagatgctgctgaaccgcaaggatgactgcaatcgcaac
atccgtgacctcggtgttctgccggaggaggcgtttgaaaagtacaccaacgagaaagtc
gaccgactcatgaagaagctgcacaacgtgaacgagggtctcaagaagtttgctcacgtc
aacaagaaggcctttgaacagtacaacaacttcacgaagcagcgtgatcagctgattcag
cgccgagaagacctcgacaagtcggccgagtcgatcgaggaacttgtcgaagtactcgac
cagcgcaaggatgaggctatcgaacgaacgttcaagcaggtcgcaagcaactttgaagag
gtcttcgagaagcttgttccagcgggacgcggacgactcgtcatccaacgacgtatcgac
caagacgaggaggatgctgaagaagcggatgagacgcaacagagcactattgacaattac
acaggcgtttcaattcgagtatcattcaactccaaagtggacgaaggcttgcggatacaa
caactgtctggtggacagaagtctttggtggctcttgcgacagtgtttgctattcagaag
tgtgatcccgcacctttttacctgttcgatgagatcgatgccaatctcgacgcccaatac
cggacggcggtagctgccatgatacacgatctatccgcgacggcccaattcattacgacg
actttccgcccggagatgttgaacaccgcagacaaattctacggagtcttattcaataac
cagaaggtcagcaccattcggtccatcaggcgggaggaggccatggagtttgtggaacag
gaagcgcaagcgcaatga
DBGET
integrated database retrieval system
