Dichomitus squalens: DICSQDRAFT_156571
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Entry
DICSQDRAFT_156571 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_156571
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_156571
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
DICSQDRAFT_156571
RSC complex
DICSQDRAFT_156571
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
DICSQDRAFT_156571
SWI/SNF complex
DICSQDRAFT_156571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
QLQ
ResIII
SnAC
HDA2-3
DEAD
PTSIIA_gutA
DUF285
Motif
Other DBs
NCBI-GeneID:
18837643
NCBI-ProteinID:
XP_007368429
JGI:
156571
UniProt:
R7SSS9
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MAAPNVAPNPHQVPQPHFPNIPAQQQLNANNAAFRERMQHLIQRANQLRAGGATVQNNEE
FAKIWNVIQNLQQRQRQEQAAGDHSHPGVNGQASMGPIANGVPATNGNALTAGPVSNQPY
PQAPQTPVSFTPDQINALRAQIHAFKLISRGMPVPEPIQQAIRVPNQAIPDLQTLLHGAD
VNARVIDSAVKIHKSTNGTPVNGVVEHPPVAEVTPAPPETIKEEEIEAVDPEKLPKGPLL
EEDVNSGIYPYNAYTHPFTFLKRDPDVSPALWATKMQRLLVPSVMPVGLDPHQVIEERNA
YIDARIEQRMRELEAMPAMMGDGGLENPLEEAENAEPQSLEQPAYVHPPSNTHGKLRALI
ELKALRVVDKQRQLRASVAERLMHGTLLPLNRADFRRTRKVQLRDIHNTEVAERKQRMDR
ERRAKQKHIEQLGIICTHGREVLAVGRAAQERVTRLGKAVLSFHAHTEKEEQKRIERLAK
ERLKALKNDDEEAYMKLIDTAKDTRITHLLKQTDAYLDSLAQAVVEQQRSEGHEAVDYDM
EEGPVSEATFGAKAFSQEEDKGKLDYYAVAHRLKEKISAQPSILVGGTLKDYQLKGLQWM
VSLYNNKLNGILADEMGLGKTIQTISLITFLIESKKQRGPYLVIVPLSTMTNWSSEFAKW
APSVKMISYKGNPAQRKVLQTDLRTGNFQVVLTTYEYIIKDRIHLSRMKWIYMIIDEGHR
MKNTQSKLAQTLTQYYHSRYRLILTGTPLQNNLPELWALLNFALPKVFNSVKSFDEWFNT
PFANSGTGDKIELNEEEALLIIRRLHKVLRPFLLRRLKKDVESELPDKVEKVIKVRMSAL
QSQLYKQMKKYKMIADGKDAKGKPGGVKGLSNELMQLRKICQHPFLFESVEDRVNPSSMI
DDKLIRSSGKIELLSRILPKFFATGHRVLIFFQMTKVMDIMEDFLKMMGWKYLRLDGGTK
TEDRAGHVQLFNAPNSEYKVFILSTRAGGLGLNLQTADTVIIFDSDWNPHADLQAQDRAH
RIGQTKVVRILRFITEKSVEESMFARARYKLDIDDKVIQAGRFDNKSTQEEQEEFLRSIL
EADQEEENEEAGDMNDDEINEIIARSDEEAVIFHEIDVQREREALEKWRRAGNRGKPPPP
LMQLEELPECYRADEPFAEPDAIDELEGRGHRRRTVVNYNDGLSDDQWALALEEGEDLQE
LSERAREKKERRAQNKLLKDIDIVDSPGPDLDTPRGSRKNKKGKGKVPAADFDLGTPASS
SKRKRGGGKSTSMTPSLIDDEDDERDTKRRKTKQELPPPIKEKMKKALNDVHKAVQNLED
ETGRRRSDLFRELPDRREYPDYYQLIQQPIALSTIRKRISSHYYKNVLDFREDMRLMFNN
ARTYNQEGSWVYVDAEEMEKVFDAAFAKHIVGSGLPGAPSGSAAGGSSGGYDSALTPVDD
DDSRPAPSRSKSARKQVISDDEYMTPSDEE
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccgaacgtcgcccccaaccctcaccaggtcccccaacctcattttcccaac
atccccgcccaacagcagctcaacgctaacaatgctgccttccgcgagcgcatgcagcat
ctcatccagcgcgccaaccagcttcgggctggcggcgctaccgtacagaacaacgaggag
ttcgcgaagatatggaacgtcatccagaatctgcagcagcgacagaggcaagaacaggcc
gcgggcgatcactcacatccaggagtaaacggccaagcctccatgggacccatagcgaat
ggcgtacccgccaccaacggcaacgctctgacagcgggacctgtctccaatcaaccctat
ccccaagcaccgcagacccccgtgtccttcactcccgaccaaatcaacgcactccgtgcc
caaattcacgccttcaagctcatatcacgcggcatgcctgtaccggaacccatccagcaa
gcgatccgtgtgccgaaccaggctatccccgatttacagaccctcctccacggtgctgat
gtgaatgcgcgcgtcattgacagcgcagtcaagatccataagagcacgaacggcactccc
gtcaacggcgtcgtcgagcatccccccgtggcggaagtcacgccggcacccccggagacg
atcaaggaagaggagattgaggcagtcgatcccgagaagttgccgaaggggccgttgctc
gaggaggacgtcaactcgggaatttatccgtacaatgcgtacacgcacccattcaccttc
ctgaagcgcgacccggacgtgagtcccgcgctgtgggcgacgaagatgcagcgattgctc
gtcccgtcggttatgcccgtcggcctagacccgcaccaagttatcgaggagcgcaatgcg
tacatcgacgcacggatcgagcagcgaatgcgagagctagaggcgatgccagccatgatg
ggcgacggcggtctggagaacccgcttgaggaggccgagaatgcggagccgcagtcgctc
gagcaacctgcctacgtccaccccccgtcgaacacccacgggaagcttcgcgccctcatt
gagctgaaggcgctgcgcgttgtggacaagcagcggcagctacgtgcgtcggtggcggaa
cggctcatgcatggaacgctgctcccgctgaatcgggcggacttccggaggacgaggaag
gtgcagctgcgcgacatccataatacggaggtcgcggagcgcaaacagcgtatggaccgc
gagcgtcgcgcgaagcagaagcacatcgagcagctgggcatcatctgcacgcacgggcgc
gaggtgctcgccgtcgggcgggcggcgcaggagcgcgtcacgcgtctgggcaaggcggtg
ctcagcttccacgcgcacacggagaaggaggagcagaagcgaattgagcgactggcgaag
gagcgtctgaaggcgctgaagaacgacgatgaggaggcgtacatgaagctcatcgacacg
gcgaaggacacacgcattacacacttgttgaagcagacggacgcgtacttggactcgctc
gcgcaggcggtcgtggagcagcagcggtcggaggggcacgaggcggtggactacgacatg
gaggagggcccggtgagcgaggcgacgttcggcgcgaaggcgttcagtcaggaggaggat
aaagggaagctggactactatgcggtcgcgcataggctcaaggagaagatttcggcgcag
ccgagcatcctcgtgggcggtacactcaaggactaccagctgaagggtctgcagtggatg
gtcagcttatacaacaacaagctgaacggtatccttgcagacgaaatgggtctcgggaag
actatacagacgatctcgctcatcaccttcctcattgagtcaaagaaacagcgcgggcca
tacctcgtcatcgtgccgctgtcgaccatgaccaactggtcgagtgagtttgccaagtgg
gcgccgagcgtgaagatgatctcgtacaagggcaacccggcgcagcggaaggtcctccag
acggacctccggacgggcaacttccaggtcgtccttaccacgtacgagtacatcatcaag
gatcggattcacctcagtaggatgaagtggatatacatgatcatcgatgagggtcaccgt
atgaagaacacgcagagtaaactagcacagacgctcacgcagtactaccactcccgctac
cgcctcatcctcaccgggacgccgcttcagaacaacctcccagaactgtgggcgctgctc
aacttcgcgctgccgaaagtctttaactctgtcaagtcattcgacgaatggttcaacact
ccgttcgcgaactcgggcacgggcgacaagatcgagctgaacgaagaagaggcattgctc
atcatccgtcgtttgcacaaggtgctgcgtccgttcttgcttcgtcgtctcaagaaggac
gtcgagtcggagctgccggacaaggtcgagaaggtgatcaaggtccgcatgtcggcgttg
cagtcgcaactgtacaagcagatgaagaagtacaagatgatcgcggacggcaaggacgct
aaaggcaaaccgggtggcgtcaagggtctgagcaatgagcttatgcaactgcggaagatc
tgccagcacccgttcttgttcgaaagcgtcgaggacagggtcaacccgagctcaatgatc
gacgacaagctcattcggagctcgggcaagatcgagctgctctcgcgaatcctgccgaag
ttcttcgctaccggccacagagtcctcatcttcttccagatgacgaaggtcatggatatc
atggaggacttcctcaagatgatgggctggaagtacctccgtctcgacggtggtacgaag
accgaagaccgtgcaggtcatgtccagctcttcaacgctcccaactccgagtacaaggtc
ttcattctctcgactcgcgctggtggtcttggcctcaacttgcagaccgccgacactgtc
attatctttgacagtgattggaatcctcatgcggatctccaggcgcaggaccgtgctcac
cgtatcggtcaaaccaaggttgtccgtatcctgcggttcatcacggagaagagtgttgag
gagtcgatgtttgcgcgcgctcggtacaagctcgacatcgatgacaaggtcatccaggcc
ggtcgtttcgacaacaagtcgacccaggaggagcaggaggagttcttgcgttctattctc
gaagccgatcaagaggaggagaacgaggaggccggcgacatgaacgacgacgagatcaac
gagatcatcgcccgttcagacgaggaggccgtgatcttccacgaaatcgatgttcaacgc
gaacgcgaggctctggagaaatggcggcgcgctggtaaccgcggcaagcccccaccgccc
ctcatgcaacttgaagagcttccggagtgctatcgggcggacgagccattcgccgagcct
gacgccatcgacgagctagagggccgtggacaccgtcgtcgcaccgttgtcaactacaac
gacggtctcagcgatgaccagtgggcattggccttggaggagggtgaagacctacaggag
ctttccgagcgtgcccgtgaaaagaaagagcgtcgtgcccagaacaagctactcaaggat
attgacatcgtcgactcgccgggtcccgacctcgacactcctcgtggtagtcgtaagaac
aaaaagggcaagggcaaggtgcccgcggccgacttcgatctaggcactcccgcgagcagc
agcaagagaaagcgtggcggcggcaagtcgacatcaatgactccctcgctcattgacgat
gaggatgatgagcgcgacactaaacgccgcaagacgaagcaggagctgccaccacccatc
aaggagaagatgaagaaagctcttaacgacgttcacaaggctgttcagaatctcgaggac
gagacgggccggaggcgcagcgacttgtttagggaactcccagatagacgggaataccct
gactactatcagctcattcagcaacctatcgccctttcgaccatccggaagcgtatcagc
tcgcattactacaagaatgtcctcgacttccgggaagacatgcgactgatgttcaataat
gctcgaacgtacaatcaggagggctcatgggtgtatgtcgatgcagaggagatggaaaag
gtattcgacgctgcattcgctaagcacatcgtcggcagcggcctacctggggcaccatca
ggcagcgcggccggcggttcgtctggtggctatgactcggcactgacgcccgtggacgac
gacgactcgcgaccagccccttctcgtagcaagagtgcacggaagcaggtcataagcgat
gatgaatacatgaccccgagcgacgaggagtga
DBGET
integrated database retrieval system