Dichomitus squalens: DICSQDRAFT_156598
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Entry
DICSQDRAFT_156598 CDS
T03133
Name
(RefSeq) TIP120-domain-containing protein
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsq04121
]
DICSQDRAFT_156598
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsq04147
]
DICSQDRAFT_156598
Ubiquitin system [BR:
dsq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
DICSQDRAFT_156598
Exosome [BR:
dsq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DICSQDRAFT_156598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
TOR1L1_N
HEAT_EZ
PDS5
HEAT
HEAT_2
Cnd1
CLASP_N
HEAT_ECM29
mTOR_dom
RTP1_C1
MMS19_C
Motif
Other DBs
NCBI-GeneID:
18837650
NCBI-ProteinID:
XP_007368470
JGI:
156598
UniProt:
R7SRW9
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MTKSYIMNGLVEKMQSPDQDFRYMGLNDLLLEIKQDPNSFLGDETTENKVLRQVLSLVED
KISEVKNQAVKCLGQLIKIIRESQMEFVVDKLIDFSAGKDEELRDISGLALKTITSELPP
EGKIAAKACEKLTPKLLGQVANSDTPPETLIETLAILSILITRFPAYLSNVEPPPVIVLT
PVLNHSRPAVRKRAITTLAQFLPHAQPQEFSTLLSSIIIPGLAPSANVEKQRTVVQLVAA
IARHSPHQIAPTLSDIIPNILKDSQRDDEELRESSLQALEAVVLRCPSEVTPYLKSVIQV
GNQYIKYDPNYAGDLDDEDEEMPDEDDEDDEDLGDEYSDDEDTSYKIRRSATKLLAAVVA
TRPELLTMLYKEVSPVLISRFGDREETVRLEVWSTYGVLLNQTSVYGGSPQNNAEYTVGG
KRKREEGMEVEESPYNLLQSQVPSLSKALLGQIKSSKTPPATLEAGFSLLYKLLTVLPGC
LASQSAQIISTAKAVLSSSSRASSASLQVTTMSFLTLFFSKHAPPVYAGQLDSITPLLLQ
ALGEKHPRIATEAFRIFSALLIAMHPVKGGAWVDRVYDEAVKRLSNHDTDADVRAGAEEV
IGDLWVSATDVLKTKNRKEWEYICRTSGRTDGAVRVVTKVATKVEIGDDWVNGGVEWVTV
LLKKSGRSGKIDVFNCLGSLLKKYNTIPPDLPINLIPPLKPYLNASDISLLGAALDILAL
LLELAPKATFPEVEREVLSDVYGIAYSPLLSGAPFESLLGFWGALVEADMQIATHVIPNL
VAAVERAPKAEASLTNVAKCVGQVVISQRAVAAGTIAEFARHLKPTSKAKTSQVVLSLLV
VGEVGRLIDMSPQQEIFNQAIERFAAEQEEVRTAAAFAAGNIAVGNLHHFLPLIVKMVEH
DQEKRLLSLHAIKEIVTHCSHGQLETVAEQLWTPLFENSENTEETTRNVAAACLGKLTTT
QPARFLPQLHERIKDPNPATRATVLSAIRYTFAEAQPSFDELLGSVILDFLSLLSDADLT
VRRLALSALNSAARSRPHLIRDHLSTLLPSLYKETVVNPDLIRTVQMGPWTHKVDDGLEA
RKTAYETLYTLLDTCLMKLDLHDFLGHVATGLADDSDEVKVICHMMLFRLAQVAPTAVAQ
RLDDLTPPLEKSMKGPAVTKDTVKQDLERTAELQRSTLRAVAALSKISQSGASPKFDAFV
AATSKSPEWGHEFRELVGA
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcgtatataatgaacggtctggtggagaagatgcaatccccagaccaggac
ttccgctatatgggtctgaacgacttgttgttggagatcaagcaggatccaaacagcttt
ctcggcgatgagacgactgagaacaaggtcttgcgacaagttctctccctggtcgaggac
aagatctcggaagttaagaaccaagccgtcaagtgcttgggtcagctcatcaagatcatc
cgggaatcccagatggagttcgtcgttgacaagctgattgatttctccgcggggaaggac
gaggagctacgagatatctctggtcttgccttgaagactattacgtcagagcttccacca
gagggcaagatcgcggcgaaggcgtgcgagaagctgactcccaagctcctcggccaggtg
gcgaattctgacaccccacctgagaccttaattgagactcttgctatcttgtccatcttg
atcactcgtttccccgcatacctctctaatgtggagccgccgcccgtaattgtgcttacg
ccagtcctgaaccactctcgtccggccgtaaggaaacgtgcgatcactactttggcacag
tttctgccgcatgcgcagccgcaggagttctctacgctcctttcctctatcatcatacct
ggacttgccccgtccgccaatgtcgagaagcagaggacagtcgtgcaactagtggcagcc
attgcgcgtcattcaccacatcagattgcaccgacactgagtgatatcatccctaacatc
ctcaaggactcacagagagacgatgaggagcttcgggagagttccctgcaggccctcgag
gcggtcgtattgaggtgcccgagtgaggtcacaccttacttgaagtctgttattcaggtc
ggcaaccagtatatcaaatatgatccaaattatgcaggcgatctcgacgatgaagatgaa
gagatgcccgacgaggacgacgaggacgatgaagacctcggcgacgaatactcggacgat
gaggatacctcgtataaaattcgtcgttcagcaacaaagctacttgctgccgttgtggcg
acgcggccagagctcctaacaatgttgtataaggaagtctctcccgtactcatctcacga
ttcggagaccgcgaagagaccgtgcgactagaagtttggtcaacatatggtgttcttctc
aaccaaacgagcgtttatggtggttcaccacaaaacaatgcggagtacacagtaggcggc
aagcgaaaacgcgaagagggcatggaggtcgaggaaagtccgtacaacctactgcaatca
caggttccttcgttgtcgaaggctcttcttggtcagatcaagtcgtcgaagacccctcct
gctactttggaagctggtttctcactgctctataaactcttgaccgttctccccggctgt
ctagcgagccaatctgcgcagattatctcgactgctaaggccgtcctttcttcctcgtct
cgggcaagctccgccagtctgcaggtcaccaccatgtcattcctcactttgttcttttcg
aagcacgcccctcctgtatatgctggccagctcgactctatcaccccgttgctcctccag
gctctcggcgagaagcaccctcgaatcgcgacagaggccttccgtatcttctccgctctc
ctcatcgcaatgcaccctgtgaagggtggggcgtgggtcgaccgtgtgtatgacgaagcg
gtgaagcgactgagcaaccatgacacggacgcggacgtccgcgcaggggctgaagaggtt
atcggagacctttgggtttcggcgacggacgtgctgaaaacaaagaacaggaaggagtgg
gagtacatctgcaggacgtctggacgcacggacggcgcggtcagggttgtgaccaaggtc
gcgacgaaagtcgagattggagatgattgggtcaacggaggcgtcgagtgggtcacggtc
ttgctcaagaagagcgggaggagcggcaagatcgacgtgttcaactgtttgggctctctt
ctcaagaagtacaacactatcccacccgacctgcctatcaaccttattccacctctcaag
ccctacctgaacgcgagcgacatttcgctgcttggagctgcgctggacatccttgctctc
ctgctcgagcttgctcccaaagcgacgttcccagaagtcgaacgcgaggttctgtcagac
gtgtacggcatcgcgtactccccgctcctgtctggcgcccccttcgagtccttgctcggc
ttctggggggcactcgtggaggcggacatgcagatcgcgacacatgtaataccgaacttg
gtggcggcggtcgagagggcacccaaggctgaggcgtcccttaccaatgtggccaagtgt
gtgggacaggtcgtaatttcgcaacgtgctgtggcggctggaacgatcgctgagttcgca
aggcacttgaagcccacatccaaggcgaagacgtcccaggtcgtcctcagcttactcgtt
gtaggcgaagttggtcgcttgatcgacatgtccccgcagcaagagatcttcaatcaagcg
atagagagattcgcggcagagcaagaggaggtccgcaccgctgccgccttcgccgctggt
aacatcgccgtgggcaatctgcaccacttcttgccgctcatcgtcaagatggtcgagcat
gatcaggagaagcgactgctgtccttgcacgcgatcaaggagatcgtcactcactgctcg
catggccaactcgagactgtcgccgagcagctctggacgccgttgttcgagaactcggag
aacacggaggagacgactcgcaatgtcgccgcggcgtgtctgggcaagctcacgactacg
cagcctgcacgcttccttccgcaactccatgaacgcatcaaagaccccaaccctgcaaca
agggccacagtgctttccgcgattcgctacactttcgcggaggcgcagccatcgtttgac
gagcttcttggcagcgtcatcttggacttcttgtccctgctttccgacgcagatctgact
gtaagacgcctcgcgctttccgcgctcaattctgctgctcgctcaagaccgcatctcatc
cgcgatcacttgtcgacgttgctgccgagcctgtacaaagagactgttgtcaacccggat
ctcatccgaaccgtgcaaatggggccttggacgcacaaggtcgacgacggtctcgaggcc
cgcaagacggcttacgagacgctatacacacttctggatacgtgcctgatgaaactggac
ctacacgacttcctcggccatgtcgctaccggtcttgcggacgactcggacgaagtgaag
gtcatctgccacatgatgctgttccgtctcgcacaggtcgcgcctacggccgttgcccag
cgcttggacgacctgacgccgccgctggagaagagcatgaagggacctgcggtgacgaag
gatacggtcaagcaggacttggagcgtactgcagagctccagcgcagtaccctgcgtgct
gtcgcggcgctcagcaagatcagccagtcgggcgcaagcccgaagtttgacgcgttcgtc
gctgcgacgtcaaagtctcctgaatggggccacgagttccgcgagctcgtcggtgcatga
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