Dichomitus squalens: DICSQDRAFT_157411
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Entry
DICSQDRAFT_157411 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dsq
Dichomitus squalens
Pathway
dsq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DICSQDRAFT_157411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_157411
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_157411
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DICSQDRAFT_157411
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DICSQDRAFT_157411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
TCRP1
Motif
Other DBs
NCBI-GeneID:
18837768
NCBI-ProteinID:
XP_007369894
JGI:
157411
UniProt:
R7SNT1
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MDEDELRPATRRQATYDEDIEEDEEDGTEEAEEDVDETEDESEEEVLRRRGRRSAQPTRA
QLSRQGDPTIIPWAREIGVDPQKMHVMQTSLFRMPEEERVLKALNEPQPRRKLLQLKSAL
TRKHSRDSEGEGLRADSRQRASFADDIEPEVYRPSRKYARVESSASAFVGREGAYVDAGL
ALGRSFRVGWGPGGLLLHLGELCGPSSTPTSSANVSTVKMTTVPLLAGTAADASAQASRL
LSHHLHHTVIEEDEDGVPFANPSPKLSFASFVSQFPSTDQSFEPTLFRLGRALFDTSDYR
LEQIPDPSARQRISDIRRKTELSNWLKTAVSSATESDLRKDLDARWDRTLFTLLSGYQIE
RACEKAANDGNVKLASLIAQCPGDAAFRADLQSQLDIWREQRTDAHISEDTRKVYALLAG
VVDTLQGSGGSGVEQCPDVDLAKGLDWKRAFGLQLWFGMPMDASIADVFQEYDRLWREGL
SSVAAPVPWYAERPFAEQVASKWTAPSNAQPTDALYALIKLFADPACNLSSILSSFSFSA
SPADYRLPWHLYIILSRCMRIRDLADRDTSVRREEDEEEGAVEGHSPSADLLANSYASQL
EQLGMVQEAVFVLLHLEAPAGRVKAIKELLTRSASKLDDWVTRGLVGSLKIPMTWINEAK
AIYALDSGSMYDAYELYLQAGLYDTAHDIAVVELAPDAVIRQDLILLREMLEPFEGHSVN
GWNERGRAFMDYTHAVTRLPQLRERLVKGHLSADEAAELDQLARSVPKLISILPEVLPDR
SNIRHNAALTEMTSKLVHHLDRTRPLAVAQSQIRTPFFNDATRVRNIHSTMYEKFLRTVD
VS
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacgagttgcgtcctgcgacacgtcgacaagctacatatgacgaggatatt
gaggaagacgaggaagacggaactgaggaagccgaggaggacgtagacgagaccgaagat
gaaagcgaagaagaggttcttcgacgacgagggcggaggagtgcgcagcctacacgagct
cagctctcacgacaaggcgaccctactattattccatgggctagagaaattggtgtggac
cctcaaaagatgcatgtcatgcagacttcattgtttcgaatgcctgaggaagagagggtc
ctcaaagctctaaatgagccacagccgcgtcggaaattgctgcagctcaagtcagccttg
actaggaaacacagcagggattcagaaggcgagggcttgcgggctgattcgcgtcagcga
gcatcgttcgcggacgacattgaaccagaggtgtatcgaccctcacgaaaatatgcacgg
gtagaaagctccgcctccgcgtttgttggccgcgaaggcgcgtacgtagacgcgggtctg
gcactgggtcgttctttccgagtggggtggggtccaggaggactcttactacacctcggg
gaactatgcggcccctcgagcacgccaacatcttcggcgaacgtgtcgaccgtcaagatg
accactgtcccactccttgctggcaccgcggccgacgcgtctgcgcaggcctcccgcctt
ctatcgcaccacctccatcatactgtgatcgaagaagatgaggatggtgtgccctttgcc
aacccttcgccgaagctttccttcgcatcctttgtctcccagttcccatccaccgaccaa
tccttcgaaccgactctattccggctcggtcgcgcgctcttcgataccagtgactaccgc
cttgagcagatacccgacccctccgcccgccagcgaatttccgatatccgccgtaaaact
gagctatcgaattggctcaagaccgctgtctcgtccgccacggagtccgacctccgcaag
gaccttgacgcgcgctgggaccgtaccctcttcaccctcctgagcgggtaccagatcgag
cgcgcgtgcgagaaggcagctaatgacggtaacgtcaagcttgcgtccctcattgcgcaa
tgtccgggagatgcggcgttccgcgcagatcttcaaagccagctcgacatctggcgcgag
cagcgcacagatgcgcacatctccgaggatacccggaaggtatatgccctccttgctggg
gtggttgatacgctgcagggctcaggcggcagtggggtggagcagtgtccggatgttgac
ttggcgaagggcctggattggaagcgcgcatttggcttacagctgtggtttgggatgccg
atggatgcgtcgatagcggacgtgttccaggaatacgaccgcctttggcgggaaggcctt
tccagcgttgccgccccagtcccctggtacgccgagcgacccttcgcagagcaagtcgca
tccaaatggactgcgccttcgaatgcgcagccgactgacgctctgtacgcgctcatcaag
ctattcgcggatcctgcgtgcaacctctcctccatcctttcctcgttctcgttcagcgcg
tccccggcggactaccgtctgccgtggcacctatacatcatcctctcccgttgtatgcgc
atacgggacctggctgaccgggatacgtctgtgcggcgcgaagaagatgaggaggagggt
gcggtcgaaggccacagcccaagtgcggaccttctcgctaacagctacgcgtcgcagctg
gagcagttgggcatggtccaggaggctgtattcgtgctgctgcacctcgaagcccccgct
gggcgggtgaaagccatcaaggagcttctcacacgatctgcctcaaaactcgacgactgg
gtcacccgtgggctcgtggggagcctcaagatacccatgacgtggatcaacgaagcgaag
gccatatacgcacttgacagcgggagcatgtacgatgcctacgagctctatctccaggct
gggctatacgacactgcgcacgacatcgccgttgtggagctcgcgccggacgccgtcatc
cgacaggatctcatccttctcagagaaatgttggagcctttcgagggacactccgtgaat
ggatggaacgagcgtggaagggcgttcatggattacacgcacgctgtcacccgccttcct
cagcttcgcgagcgtctcgtgaaagggcacctcagcgccgacgaggcagccgagctcgac
cagcttgcgcgtagcgtgcccaagttgattagcatcctcccggaagtcctgcccgaccgg
tcgaacatcaggcataacgccgcgctgacggagatgacgagcaagctagtccatcatctc
gaccggacccggccgttagctgtggcgcaatcgcagattcggacgccgttcttcaacgac
gctacccgcgtgcgcaacatccattccactatgtacgagaagttcctccggacagtcgat
gtgtcataa
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