Dichomitus squalens: DICSQDRAFT_158660
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Entry
DICSQDRAFT_158660 CDS
T03133
Name
(RefSeq) spindle pole body protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_158660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_158660
Spliceosome [BR:
dsq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
DICSQDRAFT_158660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
18837891
NCBI-ProteinID:
XP_007360538
JGI:
158660
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MSTASKHADGLVQSERPAKRVRVSGEAEDEDELEDGGTPPNAQEEPQKASDLYLDTINRA
VLDFDFEKVCSVSSSNINIYGCLVCGKYFQGRGRNSYAFAHAIHDDHHVFINLETTKVYV
LPDGYLVSDPSLDDISFVLAPKFTLASVSTLSTPEHLRKPSYDLSNKPYIPGYIGLNNIK
RNDYMNVVIHSLLHVTTLRDHLLLSNFRGKEPELLKRFAGLAKKMWNPRLFKSQVSPHEF
LQEVNRASAGKFSLEKQGDPIDFLGWLLNHLHKDMGGTKKKNSSWSSGRRYCGPPNDLLL
IGVIFSTFQGEVRMETQQVLVRPDTGGNEKPRFDIDREIKSNVSPFLFLAVDLPPPPLFQ
DAVEKNIIPQVSIQSVLDKYDGQKTQESSGQLRRFKCQRLPPYIILHFKRFTKNMFVEEK
NPTIVNFPLRGLDFKDYLDASAVHPSTVYDLIANVTHESAAGTTRDKESTIWKVQLRAGA
GGGENERWYQIQDLIVEEIRKEMIVLGETVLQIWERRPSISPSNGMEADK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgcttctaaacacgccgatggattagtacagtcagaacgccctgcaaagagg
gttcgtgtatctggggaggccgaagacgaggacgagttggaggacggaggtacgcctccc
aatgctcaagaggaacctcaaaaggcttcagatttgtatcttgacaccatcaatagagct
gtattggactttgacttcgagaaggtctgttccgtgtcatcatcgaacatcaacatctac
ggctgcctcgtttgtggcaagtacttccaagggcgagggcgcaattcctacgcattcgcc
cacgcgattcacgacgaccatcacgttttcataaacctcgagacaactaaggtgtatgtt
ctccccgacggttaccttgtctcagacccgtctctagacgatatctcgtttgtgctagcc
ccgaagttcacactagcgtcggtctccaccctctccacccccgagcatctgcgaaaaccc
tcctacgatctgtcgaataagccttacattcctggttatatcggtctgaataacatcaag
aggaacgactacatgaacgttgtaatccactctctcctccatgtgaccactctacgagat
catctactcctttcaaactttcgcggcaaggagccagaattgttgaaacgtttcgctggt
cttgcgaagaagatgtggaatcctcgcctgtttaagagccaggtcagcccgcacgagttc
ttgcaagaggtcaaccgagccagtgctggaaagttcagccttgagaagcaaggagatccc
atcgactttctcggctggttactgaaccatttgcacaaagatatgggcggaaccaagaag
aagaactcgagttggtcttccggtcgacgctactgtggaccacctaatgacctgcttttg
ataggcgtgatcttttccacgttccaaggggaagttcggatggagactcagcaagtgctc
gtacgacccgataccggaggtaatgagaagccccgcttcgacatcgatcgagagattaag
tcaaacgtatcgccgttcctgttcttggccgtcgatttaccccctccgcccttgttccaa
gacgcggttgagaaaaacatcatcccgcaagtgagcatccaatcggtcctcgacaaatac
gatggtcagaagacgcaggaatcttcgggtcaattgagacgtttcaagtgccagcggtta
ccgccctacatcattctccacttcaaacgcttcacaaaaaacatgttcgtcgaggagaag
aacccaactattgtgaactttccgctccggggtctcgactttaaagattaccttgatgca
tcagctgtacacccttctaccgtttatgacttgatagcgaatgtgacgcacgagtccgcc
gcagggaccacccgggataaggaaagcacaatctggaaggttcagctgcgagccggtgcg
ggtggcggggagaacgagcgttggtaccagatccaagatctcatcgtcgaggagatcaga
aaggagatgatagtccttggagagacagttcttcagatttgggagcggagaccaagcatc
tctccgagcaacggaatggaggctgacaagtag
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