KEGG   Dichomitus squalens: DICSQDRAFT_164635
Entry
DICSQDRAFT_164635 CDS       T03133                                 
Name
(RefSeq) TFIID and SAGA subunit
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dsq  Dichomitus squalens
Pathway
dsq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DICSQDRAFT_164635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsq03021]
    DICSQDRAFT_164635
   03036 Chromosome and associated proteins [BR:dsq03036]
    DICSQDRAFT_164635
Transcription machinery [BR:dsq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     DICSQDRAFT_164635
   Coactivators
    SAGA/TFTC/STAGA complex
     DICSQDRAFT_164635
Chromosome and associated proteins [BR:dsq03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     DICSQDRAFT_164635
    STAGA complex
     DICSQDRAFT_164635
    TFTC complex
     DICSQDRAFT_164635
    SAGA complex
     DICSQDRAFT_164635
    SLIK complex
     DICSQDRAFT_164635
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st TFIID_NTD2 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_SCAP NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_VPS8 WD_LRWD1 Beta-prop_EIPR1 WD40_RFWD3 Tricorn_2nd Beta-prop_SPT8 eIF2A Beta-prop_HPS5 Cytochrom_D1 Beta-prop_WDR75_2nd ELYS-bb Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 18838359
NCBI-ProteinID: XP_007360286
JGI: 164635
LinkDB
Position
Unknown
AA seq 765 aa
MSAATPAASTPDGASTPAANPAAEGPSSNTSAIDRMVLEYLRSRGHKDPEKILEEIERSA
TPSDDQGKQPETTPAHSISQEELVKQLAIFAQKPANPDENALKDGTNVLQELSTMGNPQN
IQNLISSIGPVGAEEILSLDPTDKHQGFRELQSWVDGSLDMYRPEFRPILFPIFCHFYLD
LVQQGFREAAQDFYTTFSHSLSPIHQTTLHHLSTITLPYHVQTDEVAQRFRSEKYTVRMS
RSGFSLLIGWLTEGFGGEPTGTGEGFSGDKGKRGRAAIMRVVNNHLRFDVTSSSTTSVSP
RAWEESTGFLSSVVPQTNGSTTDASTYNASKGELKLGPAPIAEELRTETERTLRDQALVD
HDPGAQYDIHYARQAPLTGLVSPAISDLPPHPPSFRSVDVKREVEKVRDARKRIRYDPSV
LNSANANTPQGAAVRARALPSICAYTFHDVGEGVPCCEFSPDTSLLAAGFSESYIRLWSL
KGEKLKGMRSDFQTTSIRDVSSLNKIREKGGSTTRKLIGHSGPVYSVAFDPVGGSASPPR
YLLSASADATTRLWSLDTMTNVVAYRGHQNPVWDVKWSPMGIYFATASRDRTARLWSTDR
TSALRIYAGHLSDVNAVGFHPNSLYLGTASSDGTARLWDVQRGACVRVFYRHDDIVSTLA
FSPDGRYLATAGEDLAIRLWDLGSGRCVKKMTGHTASVYSLAFSAESSLLVSGGADWTVR
CWDVKAAGGLPTKARENGATVNGTSDEHPPEKEETTENIETYASR
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgtctgctgcaacccctgcagcttccactccagatggagcatccacccctgccgcgaac
cctgccgcggagggcccatcgagcaacacgtccgccatcgaccgaatggtgcttgagtat
ctgcgctcgcgcggacacaaagacccggagaaaatccttgaggagatcgagcgcagcgca
accccttcggatgaccagggcaagcaacctgagactacaccagcgcactctatttcgcag
gaggaattagtgaagcagctcgcaatcttcgcgcagaaacctgccaacccggacgagaac
gctttgaaggatggaacgaatgtcctacaagagctctctaccatgggaaaccctcagaat
atccagaacctcatatcgagcatagggccggttggagctgaagagattctctcgcttgac
cctacggataagcatcaaggattcagggagttgcagtcgtgggtggacgggtctctggac
atgtaccggcccgagttcagacctatcttatttcccatcttctgtcatttctaccttgat
ctggttcagcaaggttttcgggaagccgcccaggacttctacactacgttctcgcattca
ttatcccctatacaccagaccacgttacaccacctctcaacaatcactttgccataccac
gtccagacggacgaagtcgcgcagcgcttccggtctgagaagtatactgtacgaatgagc
cgatccgggttcagcctcttgataggctggttgaccgaaggctttggtggcgaaccgacg
ggcacaggagaaggcttctctggagacaagggcaagcgaggacgagcggctatcatgagg
gtggtgaataatcacctacgcttcgacgtaacgtcttcgtccacaacctctgtttcccct
cgagcatgggaggagtcgacgggcttcctttcctccgtggtgccacaaactaacggaagc
acgactgatgcttctacctacaatgcttccaaaggagagctcaagcttggccctgcacct
atcgctgaggagctgcgaacggaaactgaacgcactctcagggatcaggcgttggtggac
cacgacccaggagctcagtatgacatccactatgcccgacaagcaccactaacaggttta
gtgtcgcctgcaatctcggatctccctccacacccaccgtccttcaggagcgtggacgtc
aagcgcgaggtggaaaaagtccgtgatgcacgaaaacgaattcggtatgacccttctgta
ctcaactcggcaaacgcgaataccccgcaaggcgcggccgtacgagcgcgtgcgcttcct
agcatatgtgcatatacattccatgatgtcggcgagggagtgccgtgctgcgagttctca
ccagacacgtcccttctggcggcaggcttctcagaaagctacatccgcttgtggagtctg
aaaggcgagaagctgaaagggatgcggagcgatttccagacaacttcaatacgcgacgtc
tcgtcactcaacaagatccgagaaaagggcgggtcgacaacgcgcaagctgatcgggcac
agcggacctgtgtactccgtcgcgttcgaccctgtcgggggctctgcgagtccgccaaga
tacctcctttccgcctccgcagacgccacgacgcgcctatggtcgcttgataccatgacg
aacgtcgttgcctatcgtgggcaccagaatccggtgtgggacgtgaaatggagtccaatg
ggcatctacttcgcgactgcatctcgggaccgaactgcacgactgtggtcgactgaccgg
acatcagctctgcgcatatacgcagggcatcttagtgatgtcaacgctgtggggttccac
cccaattcgctgtacctcggcacggcatctagtgatggcaccgcgaggctgtgggacgta
caacgcggggcgtgcgtccgtgtcttctacaggcatgatgacattgtgtctacgcttgcc
ttcagcccggacgggcgctatctggccacagctggggaggacctagcgatcagactttgg
gatttagggtcgggtagatgcgtcaagaagatgacgggccatactgcatcggtgtactcc
ttggcctttagcgcggagtctagcctgctcgttagcggcggggcggactggacagtccgt
tgctgggacgtcaaggctgctggaggactgcccaccaaggcacgcgagaacggggcgacg
gtcaacggtacgtcggacgagcatccgcctgagaaggaggagaccaccgagaacatcgaa
acgtatgcatcccgttaa

DBGET integrated database retrieval system