Dichomitus squalens: DICSQDRAFT_165867
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Entry
DICSQDRAFT_165867 CDS
T03133
Name
(RefSeq) miller-Dieker lissencephaly protein
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
dsq
Dichomitus squalens
Pathway
dsq00565
Ether lipid metabolism
dsq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
DICSQDRAFT_165867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_165867
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsq04147
]
DICSQDRAFT_165867
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DICSQDRAFT_165867
Exosome [BR:
dsq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DICSQDRAFT_165867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
LisH_PAC1
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_RFWD3
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
Beta-prop_RIG_1st
Beta-prop_HPS5
PEP5_VPS11_N
Nucleoporin_N
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
WDR54
ADIP
Motif
Other DBs
NCBI-GeneID:
18838509
NCBI-ProteinID:
XP_007361433
JGI:
165867
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MSMLSERQKEELQKSILEYLHANNFTGAFNALKADTGLEYTPDPKGKYVGLLEKKWTSVI
RLQKKIMDLENRNAALQEELSLSPAKRASLQTDWVPRAPAAYVLTGHRNQVTKVAFHPTF
NLLASASEDATVKIWDWETGEFERTLKGHTRSVTDVSFDSRGNLLVTCSSDLFIKIWDVQ
NEWKNTKTFSGHDHSISCVRFMPGDQQIVSASRDRTIRIWDVASTHLVRTITGHSDWVRW
VEPSDDGRLLASCSNDQTARIIDPQTGETKVELRGHEHTVEVVAFAPLAAYAAIRELAGI
PNTERSKRAGAYLVTGSRDKTIKLWDTQSGQMLRNLAGHDNWVRALIFHPTGKFLLSASD
DYTIRVWELATGRCVKTVQAHGHFVTCLAWGRQAPSQSGGEAAKTNGAGDGHQEVEKFVN
VVASGSVDQTIKIWLP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgctctcggagcggcagaaggaggaacttcagaagtcaatcctcgaatatctg
catgccaataacttcacgggtgctttcaacgcgctcaaggccgatactggcctggagtat
acacctgacccgaaagggaagtatgtcgggctgttggagaagaagtggacgagcgtgata
cgattgcagaagaagattatggacttagagaaccgcaacgccgcgctccaagaagaactg
tcactatcaccagccaaacgcgcttccctccagaccgactgggtgcctagggcaccggcc
gcatatgttttgacgggccaccgtaatcaagtgaccaaagtcgcgttccatccgacattc
aaccttcttgcttctgcaagcgaagacgcgaccgtgaagatatgggactgggagacggga
gagtttgagcgtacgctgaagggtcatacgcgctccgtgacggatgtctctttcgatagt
cgggggaatctcttagtaacatgctcgtccgatctattcatcaaaatttgggacgtgcaa
aatgagtggaagaatactaagacgttctctggacatgaccacagcatttcctgcgtgcga
ttcatgcccggcgatcagcagattgtcagtgcgagtagagaccggacaatccgcatctgg
gatgtcgcgtccacccatcttgttcggacaataacgggccactcagattgggtccgctgg
gttgagccctcggacgatgggcggctacttgcaagctgctccaacgatcagaccgcacgt
atcattgatccccaaacaggggagacaaaggttgagcttcgtggccacgaacacacggtg
gaggttgttgccttcgcacctctagctgcttacgctgcgatccgagagctagcgggaatt
cctaatacggagcgctcgaagcgtgcgggcgcgtaccttgtcacgggctcccgggataag
actatcaagctatgggatactcagagtggacagatgctgagaaacctcgctggacacgac
aattgggtccgtgcgctcatcttccacccaacagggaaattcctcctgtccgcctccgac
gattacacgatacgcgtctgggagctcgctaccggccgatgcgtaaagaccgtgcaggca
catggccatttcgtgacctgtctcgcttggggtcgtcaagcaccttcgcagagcgggggc
gaggcagcgaagacaaatggagcgggggatgggcatcaggaggtcgagaagttcgtcaac
gtcgtggcctccggaagcgtcgaccagacaatcaagatctggctgccatag
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