Dichomitus squalens: DICSQDRAFT_166531
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Entry
DICSQDRAFT_166531 CDS
T03133
Name
(RefSeq) UV excision repair protein Rad23
KO
K10839
UV excision repair protein RAD23
Organism
dsq
Dichomitus squalens
Pathway
dsq03420
Nucleotide excision repair
dsq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DICSQDRAFT_166531
09124 Replication and repair
03420 Nucleotide excision repair
DICSQDRAFT_166531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
dsq03051
]
DICSQDRAFT_166531
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_166531
Proteasome [BR:
dsq03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
DICSQDRAFT_166531
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
DICSQDRAFT_166531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
UBA_3
Rad60-SLD_2
Crinkler
UBQLN1
UBA_9
CUE
UBA_RAD5A
Dsc3_N
Ubiquitin_5
Ubiquitin_4
DUF3391
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
18838575
NCBI-ProteinID:
XP_007362151
JGI:
166531
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MKITVKTLQQKVFQIDAEGSDTVGDLKRKIQETQGHALESQKLIYSGKVLPDSKTVESCE
IKEKDFLVLMVSKPKPAPSNAPPVTSGAPVAAAPPAAAAPAPVPQATSSATALAPAPAAP
QPPNAPILTPAQAAPIEGAAPVPAGDGSFLTGEALQSTVNNMIEMGFEREQVMRALRASF
NNPERAVEYLFNGIPAHLEHMASAAPAAPALPAAQGQPSVATPAQPAQPVAQQPAQQPAA
QPQNLFQLAQQQQQQAAHPGVGAGLGGAGGGGSLADHPQIQHLRQLMQQNPQLAQPIIQE
LAAQNPGLAQVLGQNPEMLAQLLSGALAGEGDEGGDIPPGAQVVHVTEEERAAIERLEAL
GFPRQAVIEAYFACDKNEELAANYLFDGAFDDQGEP
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaccgttaagacactacagcagaaggtcttccagatcgatgcggaaggctca
gatactgtaggcgatttgaagaggaagattcaggagacccagggccatgcactcgaaagt
cagaaattgatctactctggcaaggtgctgcctgactccaagacggtggaatcatgtgag
atcaaggagaaggatttcttggtgctcatggtctcaaagccaaagccggctccctctaat
gccccaccggtcacaagcggtgctcctgtcgctgccgcaccacccgctgctgccgcccct
gcgcctgttccccaagccacctcgtctgctactgcccttgcccctgcccctgctgcccct
cagccaccgaacgcgcctatcctcactcctgctcaggctgcacctatcgagggtgccgcg
cccgtccctgccggagatggctccttcctaacaggagaggcactccagtcaaccgttaac
aatatgatcgaaatgggattcgagcgcgagcaagtcatgcgtgcgcttcgcgcgagtttc
aacaaccccgagcgtgcagtcgaataccttttcaacggcattcccgcacatctcgagcac
atggcctcagcggcccccgcggcccccgcactgcccgccgcacagggccagccgtccgtc
gcgaccccagcccagcccgcgcaacccgtagcccagcagccagcccagcagccggccgct
cagccccaaaacctcttccagctcgcccagcagcaacagcagcaggcggcacaccctgga
gtaggggccggtcttggcggtgcaggcggtgggggctccctcgcggaccacccgcaaatt
cagcacctccgccagctgatgcagcagaatccccagctcgcgcagccgatcattcaggag
cttgccgcgcagaatccggggctcgcgcaggtgcttgggcagaaccccgagatgctcgcg
cagctgctcagtggggcgcttgcgggcgagggcgacgaaggtggcgatatccctcctggg
gcgcaggtcgtgcacgtcactgaggaggagcgcgcggcgatcgaacgcttggaggcactt
ggtttccccaggcaagccgtgatcgaggcgtactttgcgtgtgacaagaacgaagagctc
gcggcgaattacctgttcgatggcgcattcgatgaccagggagagccgtaa
DBGET
integrated database retrieval system
