Dichomitus squalens: DICSQDRAFT_167961
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Entry
DICSQDRAFT_167961 CDS
T03133
Name
(RefSeq) WD40 repeat-like protein
KO
K11293
protein HIRA/HIR1
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_167961
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
DICSQDRAFT_167961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
18838769
NCBI-ProteinID:
XP_007363627
JGI:
167961
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MRGDEKRVSIFSCHVHPDGSRIATGGLDAKVRIWSTKPILNHASELSGRPPKSLSTLTMH
TGPVLVVRWAHSGRWLASGSDDEIVMIWDLDPSAKGKVWGSDEVNVEGWKPLKRLVGHES
DVTDVAWSPGDRYLASVGLDSAVLVWCGYTLERLRKIDQHQGFVKGVCWDPVGEFLATGS
DDRSVRIWRTTDWELEAEVKKPFDHSPGTFFRRLSWSPDGAHITASNATNNEGYVFIAAV
IARNSWTSEISLVGHENTVEVAAYNPHIFLRDPSQPVTAHNICSVVALGADDRAVSVWQT
KAPRPMVVAKDVFERQIMDLSWSQDGLTLYAVSSDGTMAVFSFDSSEMEGIAPSSAQEQY
LKRFGFVSPPVPEGYSHLASLQEQKAQQNNRITPPPSPRAQSQDFGSAANAAPGGEQVHT
LVAKRKPKKRIQPTFAGSLSGQIPSSSVNGIKPPPSSSSGARAFQESSTVPISVPSTSAL
PLSISQPFGTSSSFGLGLNTGESDFAMDVDDEVRISSLDGGMQNPKGKRKTGEDFDDRTA
SRARTLGGDRVREPAVARPLTNRVPPPGPPGGGVWAEGSSLVGRLEPPQLVTYLKATVEG
SEDVFEGRNAEGDEPNEVLYVSGKQTQWLDYLPSPILALTATATFCAVAMQDGTLTVYSH
TGRRLMPPLAIGSQCCALTSAKSMLMLLTVSGQLYVWDVKKQAAKFPPTSISAILGSSPN
LTVATATVRPNGAPVIQLSDGVAHSYDASLCVWTKLSEPWWSEGSDAWQGRQRSNNLAMR
GPLTVLESAISERMSVDDGRAEKVRPAWWNAALTLGHLESKLHAAKALDSPAEYKQALLL
YAKRIADEGFRGKAEELVKELFGPVYWRPGRDESWSPTMLNMPKRDLLKEVLNIFVRSKT
LTKLGQDWQETLKKSQLDE
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggagacgagaagcgcgtctcgatattctcttgccatgtccaccccgatggctcg
cgaatcgcgaccggcggtctcgacgccaaagtgcgcatctggagcacaaagcccatcttg
aatcatgcgtccgagctgtctgggaggccgccgaagtcactcagtactctcactatgcat
accggaccggtgcttgtggtacggtgggcccactccgggaggtggttggctagcggcagc
gacgacgagattgtgatgatatgggacttggacccatcggccaaagggaaggtttggggt
tcggacgaggtcaacgtagagggttggaagcctctgaaacgtctggttggccatgaaagc
gacgttacggacgtggcgtggtctccaggagaccgatacctagcgtcggttgggttagac
tccgcagtgttggtctggtgcgggtacaccttggagcggctacgaaaaatcgaccagcac
caaggtttcgtcaagggtgtatgctgggatccagtaggggagttcctggccacgggttcc
gacgatagatctgttcgaatatggcgaacgaccgactgggagctagaagcggaggtgaag
aagccctttgaccactctccaggaaccttctttcgacggctgagttggtctccagacggc
gcacatatcaccgcatcaaatgcaaccaacaacgaaggctatgtcttcatcgcggcggtc
attgcacgaaactcctggacgtctgaaattagcttggtgggccatgagaacactgtagaa
gttgccgcatacaaccctcatatattcttgcgcgatccatcccaacctgtgactgcacat
aatatctgttcagtggtcgctctcggtgccgacgatagggctgtctctgtttggcaaacc
aaagcacctagacccatggttgtcgccaaagatgtctttgagcggcagatcatggatctc
agctggtcgcaagacgggctcacactatacgctgtctcctcagatgggacaatggcagtc
ttcagctttgactcctccgagatggaaggcatcgcaccttcgtctgctcaagaacaatac
ctcaaacgctttggatttgtctcgccacccgttcccgagggctactcacatctggcttcc
ctccaggagcagaaagcacaacagaacaaccgcatcaccccgcctccctcccctcgcgcc
cagtcacaggacttcggcagtgccgcgaatgccgcgcccggtggggagcaggtccacacg
ctcgtcgcgaagcgcaagccaaagaaacgcatacagcctactttcgctggttcgctgtct
gggcaaataccgtcttcatctgtcaacgggattaagccgccgccgtcgagctcatcgggc
gcgcgtgcgtttcaagagtcgtcgacggtcccaatatctgtaccttcgacatcggccttg
ccgttatctatctcacagccgttcggcacctcgagctcgttcgggctcgggctgaatact
ggagagagcgacttcgcgatggacgtcgacgacgaggtgcgaatcagttcgctcgacggc
ggcatgcagaacccgaagggcaagaggaagacgggagaggacttcgatgaccggaccgcg
agtagggcgcgcactctaggtggggatcgcgtacgggagccggcggtcgctaggccactt
acgaaccgcgtgccgccaccgggacctccgggtggaggcgtttgggctgagggctcgagc
cttgttggaagactggaaccgccgcagttggtgacatatctgaaagccaccgttgagggt
agtgaggatgtgttcgagggcaggaatgctgagggcgatgagccaaacgaggtcctgtac
gtcagcgggaagcagacacaatggctcgactacctgccgtcgccaatccttgcactcact
gcgacagcaacattctgtgctgtcgctatgcaagatggcactctcaccgtgtactcgcat
acaggcagaaggttgatgccgccgttggcgatcggatcgcagtgttgcgctcttaccagt
gccaagagcatgctcatgctgctcacggtctccggacagctatacgtctgggacgtgaag
aagcaagcagccaagttccctccgacctctatctccgcaatcctcggatcatcgcccaac
ctcaccgtcgccaccgcaacggtccgcccgaacggggcccccgtcattcagctatcggac
ggggtcgcacactcctacgatgcctcgctctgcgtgtggacgaagctcagcgagccctgg
tggtctgagggctcggacgcgtggcaaggccgccagcggtcgaacaacctggccatgcgc
gggccgctgaccgtgcttgagagtgcgatcagcgagcgaatgtccgtcgatgacggccgc
gcggaaaaggtacggccggcgtggtggaacgcggcgctcacgctgggtcatctggagagc
aagctgcatgccgcgaaggcattggatagtccggccgagtacaagcaggcgctgctattg
tatgcgaagaggatcgcggacgagggcttcaggggcaaggcggaggagctggtgaaggag
ctcttcgggcctgtgtactggcggcctggccgtgacgagtcttggtctccgacaatgctc
aatatgcccaagagagacctattgaaggaggtgctcaatattttcgtccgcagcaagaca
ttgacaaaacttggccaagactggcaggagacactaaagaaatcccagctcgacgaataa
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