Dichomitus squalens: DICSQDRAFT_168546
Help
Entry
DICSQDRAFT_168546 CDS
T03133
Name
(RefSeq) Nop domain-containing protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_168546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_168546
Spliceosome [BR:
dsq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
DICSQDRAFT_168546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
YukC
Motif
Other DBs
NCBI-GeneID:
18838863
NCBI-ProteinID:
XP_007364219
JGI:
168546
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MASLADELLADLDGLSGEENEYDNNEEQQPEAGASTSAGVKRKAPVDEDEEMSDVEGGET
REDDEEDKAVGSLVLEGGVKPAEELDAEEVQRMELGAIDDVRKVAKLEGSKRMNDTLREI
EKYQANPSTSEQMALPTHSNPEYNLIVQANNLSVDVDNEILVVHKFIRDHYAPKFPELEQ
LVTDPPMYIRTVRALGNSEDPTKVNLQGILPPAIIMSVLVTATTTTGQPLTEANWAAVQR
ACDLADRLEEARKKIFQYVSSRMNILAPNLSAIVGTTTAAKLLGVAGGLSGIAKMPACNV
YLLGAQKKIAAGFSTIMQRKHTGFVFQSELVQGTPPEYRMKVQRTVGAKCTLAARMDLER
SRRDGSYGQQLRDKIEKHIDRLAAPPPSKIVKALPIPNDGPKKRRGGKRARKAKEAYAQT
ELQKLQNRMAFGTPEEEVGAFDQTKGLGMIGTGKVRAGVGEAKSRGAYPYPQAYSHILGR
GARSFSSSSTIFASALLFIFSKLSKANKLRVAALTKAAQSGTATATSGTATSLTVTPVQG
FELTNRAAAAARVKEANERWFSNGTFSFVGQKGTTTRK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactcgccgatgaacttctggctgacctggatggactctccggagaggaaaat
gagtatgacaacaacgaagagcagcagcctgaggccggggcatccacttcagcgggagtc
aagcgcaaggcaccggtggacgaggacgaggaaatgtcggacgtagagggcggagagaca
cgggaggatgatgaggaagacaaggcggtggggagcttggtgctggaagggggtgtcaag
cctgcagaggaattggatgcggaggaggtacagcgtatggagcttggcgcgatcgacgat
gtgcggaaggtagcgaagctggaaggtagcaagcgaatgaatgataccttgagggagatt
gagaagtaccaagccaatccgagcacctcagagcagatggcgctacccacccactcgaat
cccgagtataacctcatcgttcaagccaacaacctctctgtggacgttgacaacgagatc
ctcgtcgtccacaagttcatccgagaccactacgcgcccaagttccccgaattggagcaa
ctagtgaccgacccgccgatgtacatccgcacagtccgagctcttggcaactcagaagac
cctacgaaggtgaaccttcaaggaattctcccgcccgctatcatcatgagtgtccttgta
actgcaactacgaccaccggccaacctctgacggaggcgaactgggcggccgtccaaaga
gcctgcgaccttgctgaccgcctggaggaggcgcgcaagaagatcttccagtacgttagc
tcacgaatgaatatccttgcacccaacctatctgccatcgtcggtaccaccacagctgcg
aaactgctcggtgttgcgggtggtttgtctggcattgccaagatgccggcgtgtaacgtc
tatcttctcggcgcgcaaaagaagatcgctgctggtttctcgacgataatgcagcggaaa
cacaccggcttcgtgttccagtccgagcttgtacaaggaacgccaccagagtatcgcatg
aaagtgcaacggacggtaggtgcgaagtgcacgctggccgcccgcatggatttagagaga
tctcgtagagatggttcatacggtcaacagctccgagacaaaattgagaagcacatcgac
cgcctggcagcgccgccacccagcaagatcgtgaaagcgttgcccatcccgaacgacggc
cctaagaagcgtcgtggaggcaaacgcgcgagaaaggcgaaggaggcgtatgcacagacg
gaactccagaagctgcagaaccgcatggcattcggcacgcccgaggaggaggtgggcgca
ttcgaccagaccaagggcctcggcatgattggtaccggcaaggtgcgggcaggcgtaggc
gaggcgaagagccgcggtgcgtacccctatccccaggcgtactcccacatccttggtcgg
ggagcgaggagcttctcgtcttcctcgacgatcttcgctagcgctctgctgttcattttc
tccaagctctcgaaggcgaacaagctccgcgtggcggcccttacgaaagccgctcagagc
ggcacagcaactgcgacgtccggaaccgcgacgtcgctcactgtcactcctgtgcaaggt
ttcgagcttacgaatcgtgctgccgccgcggcgcgcgtcaaggaagcgaacgagcgttgg
ttctcgaatggcacgttttcgttcgtcgggcagaaggggacgacgactcggaagtag
DBGET
integrated database retrieval system
