Dichomitus squalens: DICSQDRAFT_176496
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Entry
DICSQDRAFT_176496 CDS
T03133
Name
(RefSeq) vacuolar protein sorting-associated protein 13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsq04131
]
DICSQDRAFT_176496
Membrane trafficking [BR:
dsq04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
DICSQDRAFT_176496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
SR-25
Motif
Other DBs
NCBI-GeneID:
18840424
NCBI-ProteinID:
XP_007360211
JGI:
176496
LinkDB
All DBs
Position
Unknown
AA seq
3144 aa
AA seq
DB search
MVWWSDPGKEVLNILFNRVLAPYVENLDMNQVNYGIGQGQVTLSKLRLKKGALDKFRLPV
DVIDGHLGKLSLSLHWMNLGNQPVEVLVEDVYLLVVPSSESTYDPEEEERRAQAAKFERL
ENAELLHVRTQTGMSQDNPQSQGLIASLVTKIINNLQVTVRNIHIRYEDKLSVPGHPFAA
GLTLAGFTAVSVNENWQPAFIDSKAGAVHKLARLESLAVYFDTDCQSLAGLSYREFVENF
TALISKGSRTASHQFILKPVSGEGKITMNHKLDKETPRFDVQLSFDEIGVLLDDNQYRDA
ISLVDMYHFYIRQHQYQKYRPPAEELQSNRPKALLNFATTAILDEVRERKRKWTWAYFAE
RRDDRLRYVDLFKKKQLGSLTGTDVGLFDALERKLSYEDLRFYRSIARSQLRKDMATRRK
LEEERKESQPQNSSSWSSWLWGSSSSTDSSGSSTEETAFTGEMTDEQRKQLYEALDFDEK
AALAESLDTPRDALKARVKAQLNRGSFALKTDPHGTNSDIISVSFDVFQATFLQRQDNFE
TSLSLGGFAVRDGTTTNTAYPLIVHVQEKRSHSQIVKTLPVDDKNHSIPELPDPFFFLKF
EQNPLDGRADNALTFRMRYMEIVYHKGYVEAVYKFFKPPASQLESVEALLDAASQTLENL
QKETRIGLEYALQTHKTVDVQMDLNAPIIIVPEDVTTTHCKHLIVDAGHISIVSELASKE
AIREIQLKRKKQYTEADYKHLESMMYDRLKVQLEAAQFLIGDDLNSCMKALKSQDRDNLH
LLERTNIDLQVQNSIVPTAYNLARFKVSGHLPTLEVNMSDTKYKALMRLIDVAIPHFDDE
EEPQAYAMRRPSDTQRRASAAFKMPAGFFGASTEDYALESDDEDHESVTSPSKQGLPEQD
EADEESEFFEADPGTATARISPALHQHVVEVNFKVDTLRASLYKSAQDGSEKPLGDVAFQ
GFGLEYAMEKYVMKVGVNLRSVLMHINQVGKDPLEFMSSATGPTNEDLLIFKYTRVQQAS
PEFQPVYEGIDQNVDMKISTFLFRAAPEPVVTVYDFIMTTFVPQTGQIETTPPNSPEGEN
GPPEIVVESGVSAQKIRVLLTLASIQVNLINDDVQIATLSLSTAYVAILLRSNTMRINGR
LGSLALNDDSSINTASPDFKRILSIEGDNFADFTYQTYDPSDHETYPSVKSSFSLQTGSL
KVHYLEHTLHDAYAFLMKLAKLKGLYDAATEVAVQRASEIERMKFDVSISTPIIVFPSDA
QHSVDVLTLRLGALSARNEYNTDDNRITAGLHGIQLASQLYHDNRRAELKMVDDIDIDAE
VTQKVNIDRSKDNDYPAVQVAVKISDVRLHLTQTQYCLLIALLQSIPKVFANVSEVELDS
PQLPSPVPVSDSQAREQTTDAVAGVDLRPEISAHSSSGEAPPYTSLDLVVTIGAVKLHLY
DASATAPEDVKEHGIARFALNDNSLRLKTLSDGALEAQIVLKSVTMSNTRPGNSKFREIM
PAAQHERNQVMLLYTMSGGQGSQSLAVVTIDSPEVIFAVDPVIALLEFFTSAFIAQNGDP
DTETESVSSPETQTTSTSSSLDFRIDLHDASVSILEDDTNAESQAIRLTVKQLLVSQQGV
FAVSVNHVGMSLTRMGKPAESVRFLDELDLTFTLDSRASEAHHSTSIEVTALPVVFRASY
RDIMLIMTIVNKAIDLYGESIQSQDESEPDKTLTRPGLTSRKISRPTTSRAQPIGSARVM
MNKEQFKGSFEGFRLVLIGDLHEQPLLHLRIKPFILGAKDWSGELQAMSTLSMHISYWNI
ANSHWEPLIDPWVFTASVAKETPSSGIKVSVNANQRLDVNVTLSFVELVLAFASMLGTEG
EQVLKNARGSYAPYKIWNRTGYPLFIWSDTEGSNGTKDTAAKQVPNGKTIDWRFDDWKTM
REHVSSSGHNSIGVQIVGKQWEHLRSVPVDREGEYTFSLRPRTGKYAHRLVCEVKVEGNA
KTVVLRSTYKVENNTLYPLELTLVDETGQPVYAVEKIVPGQDYALPLEAVNQCRVRVQPD
QGFGYKWSPAVRWEDLIAKRGFTLRCPHTDQNEAAFRFQAWAEADANDIASRKLPRISLK
LRAPIELENLLPYNLEYRIYDKDTDQNWRSYLRKGGIMPVHSVELGHLILLNIHVQDTVF
KPSDFAIINTDGNSDFDVESKLVLRDTQGRRLDLKLNYIHYPNSGGSFKVQVYSPYIVLN
KTGLPFGVRPSRTRVGAPSEIAGETREDILAKPLPFMLSHPTDNGKDFSFKIGESMWSQG
ISLDAPRAETRLVMLHQQNRSDEIHTGLSWAEGLGKYKLTKVITLAPRFIVKNNFSKPLA
IREHGVAPRDRAAVEPGERRPLNVLRFGEDKLLTVALPGLNAQWSAPINLEDIGTIHFRL
PASEDSQQIRLMRADIKIEGPTIFVFLDEATEGWPFKIENESDLTFTIHQTDQARLNAGP
GAKPPPSYTVAPKNSIDYAWDYPAARDKKIILAVNGSRRDVDIMEIGDLVPFRAATSRGT
RIVSLDVRADGPKQVLRISNYNAELSLYKPRRRSTASLTRQDSMSSSQDAFEAIQETVAP
VLTVALDLHGIGVSLINKQMVEVVYTSLNALKFEYASNPVAQSVTLSFGNLQIDNQLHDA
LFPVLLQPTPITQESKSVAALPTVQASFIWLNDQEHGVFFIKYCSVLLQALTVEADEDFL
FALYDLTKIKGASWDVAQEDVLFENPEDIPEPQETSSGLDLYFEVLELQPIKLSISFMRT
ERISSEDQLMLRNPAAVVLNAITMAIGNVNDAPLEMNALAIKDMRLTLPDLLNRITHHYR
QEVLRQLYRILGSADFIGNPVGLFTNVSSGVADIFYEPFNGVVMHGNKDIGIGIAKGAAS
FVKKTVFGVSDSFTKFTSSVGKGLSATTFDSEYQLRRRMNQRRNRPRHAIYGVAAGAEAF
ASSVVSGVEGVVLKPIEGAESEGAKGFFKGMGKGLIGAVTKPVIGVFDLASNVGAGIRNT
TTVFDNPDRDRVRLPRLIPADGVLVPYSEREALGQYWMKDLEQGAFRGETYVAHINLPGG
DNVVLLTTTKVISFWSNKLKLEWELPFTQVQGVTIEDTGIKFAHKGGKQHDKFVFIPDKS
SQTWFFSQVASVVKAFNARRRMDS
NT seq
9435 nt
NT seq
+upstream
nt +downstream
nt
atggtctggtggtcagacccggggaaggaggtgttgaatatcctgttcaaccgcgtcctc
gccccgtatgtcgagaatctggatatgaaccaggtcaactatggtatcggacaaggccag
gttacgctcagcaagctgcggttgaagaagggagctctggataagttcaggctgccagtg
gacgtcattgatggtcacttgggaaagctctctctttcacttcattggatgaacttggga
aaccagcccgtggaggtcttggtcgaggatgtgtacctacttgtcgtcccttcgtccgaa
tctacctatgatcccgaagaagaggagcgccgtgcacaggccgccaaattcgagcgtttg
gagaacgcggaactcctgcacgtccgaacccagacgggcatgtctcaagataacccgcag
tcgcagggtctcattgcgtctttggtgactaagatcatcaacaacttgcaggtcactgtc
aggaatatccacatccgatacgaggataagttgagcgtcccaggtcacccatttgctgct
ggcctcactcttgccggattcaccgccgtatctgtcaacgagaactggcagcctgccttc
atcgatagcaaagcgggcgctgttcataagttagcgcgtctagaatctcttgctgtatac
ttcgatacagactgtcagagtcttgccggactctcgtaccgagaattcgtcgagaacttt
acggctctgatctccaaaggaagtcggaccgcatcccaccagttcatcttgaagccagtc
tcgggcgagggcaagatcacaatgaaccacaaattggacaaggagacaccccggtttgac
gtacaactctcgttcgacgagatcggcgtcctcctagatgacaaccagtaccgagatgca
atctcgctcgtcgacatgtaccacttctacatccggcagcaccagtaccaaaaataccgt
ccacccgcggaggaacttcagagcaatcgccccaaggccctcttgaacttcgctaccacg
gctatcttggatgaagtccgggaacgcaagcggaaatggacgtgggcttacttcgcggag
cggcgggacgatcgcctgcgctatgttgacctattcaaaaagaagcagctgggctctttg
acaggcacggacgtgggcttgttcgatgccctggaaaggaagctctcctacgaagatctc
cgcttctaccgctctatagctcggtcccagctccgcaaggacatggccacacgcaggaag
cttgaggaagagcggaaggagagccagccgcagaatagcagctcgtggtcttcgtggctt
tggggttcatcttcttctaccgacagttccggttccagcaccgaggagaccgcgttcacc
ggagagatgacggacgagcagcgaaagcagctctatgaggcacttgactttgacgaaaag
gctgccctggcggagtcgctcgacacccctcgtgacgcgctgaaggcgcgggtcaaggcg
cagctcaaccgtgggtcgttcgcgctgaagacagacccccacggcaccaatagcgatatc
atctcggtcagtttcgacgtcttccaggcgacgttcttgcaacgccaggacaacttcgag
acgtccttgtccctaggcggctttgctgtccgcgatggcacgacgacgaacacagcgtac
ccgctcatcgtccacgtgcaagagaagcgcagtcatagtcagattgtcaagacgctcccg
gtcgacgacaagaatcatagcatccccgaactgcctgatccatttttcttcctgaagttc
gaacagaatcctctcgatgggcgtgcggacaacgcattgacgtttcgcatgagatacatg
gagatcgtctaccacaagggctatgttgaggcagtgtacaagtttttcaagccgcctgct
agtcaactcgagtctgttgaagctcttttggatgcggccagtcaaacgctcgagaaccta
cagaaggagacgaggataggtttggaatacgctctgcagacacacaagaccgtcgacgta
cagatggaccttaatgcaccaatcatcattgtcccggaggatgtcacgaccacccactgc
aagcatttgatcgtcgatgcgggtcacatttcgattgtcagcgagctcgcgagcaaggag
gccattcgcgagattcagttgaaacgcaagaagcagtatacggaagctgactacaagcat
ctcgagtccatgatgtacgaccgtctcaaggtccagctggaggcagcccagttcctcatc
ggcgacgatctgaattcctgcatgaaagcactgaagtcacaagaccgcgacaacctgcac
cttctggagcgcacgaatattgacctccaggtccagaactcgatcgtgccgactgcgtac
aacctagcccgtttcaaggtttccggtcaccttccgacgctggaggtcaacatgtcagat
acgaagtacaaggcgctgatgcggcttatcgacgtcgcgataccccatttcgatgacgag
gaagagccccaagcttacgccatgcgacgcccgtccgatacacagcggcgcgcttcagcg
gcattcaagatgcctgccgggtttttcggcgcgtcgacggaggactatgcgctcgagagc
gacgatgaggaccacgaatctgtcacgtcaccatcaaagcaagggctaccagagcaagac
gaagcagacgaagagtcagaattcttcgaagcagatcctgggacagcaacagcacgtatt
agtcccgctctgcatcagcatgtggtcgaggtcaacttcaaggtcgacacgctccgtgcg
tcgctctataagtccgctcaggatggctcggagaagcccctaggagatgtcgcgttccaa
ggtttcggtctcgagtatgctatggagaagtacgtcatgaaggttggcgtcaacttgagg
tcggtcttaatgcacatcaatcaagtcggaaaggatccgctcgagttcatgtcctcggca
actggacccactaacgaggatctgctcatctttaaatacacccgtgttcagcaggcttcg
cccgagttccagccggtctatgagggcattgaccagaacgtcgacatgaagatctcgacc
ttcttgttccgggctgctccggaaccagtcgtcacagtctatgacttcatcatgaccacc
tttgtcccccagactggacagatcgagactacgcctccgaactcaccggaaggcgagaat
ggcccgccagaaattgtagttgagtctggtgtctccgcgcaaaagattcgggttctctta
accctcgccagtatccaagtcaacctcatcaatgatgatgtgcagatcgcgactctatct
ctgtccacagcctatgtcgccatcctcctccggtcgaacacgatgcgcatcaacgggcgt
ttagggagcctcgctttgaacgacgactcctcgatcaacactgcgtctcccgatttcaaa
cggattctgtccatcgaaggggacaactttgccgacttcacgtatcagacttacgatccc
tccgatcacgagacttaccctagtgtaaagtcatcgttctcgttgcaaacaggctcgctg
aaggtccattacctggaacacacccttcatgacgcgtatgccttcctcatgaagcttgcc
aagctgaaaggcttgtacgatgcagcgactgaggttgcagtacagcgagcttctgagatc
gaacgcatgaagttcgacgtctccattagcacgcccatcattgtgtttccgtctgatgct
cagcattctgtggacgttcttactcttcgtctcggtgctctaagtgctcgcaacgagtac
aataccgacgacaatcgcatcactgcgggtctgcatggcatacaactcgcgtcccagctg
tatcacgataaccggcgtgcggagttgaagatggttgacgacatcgacatcgacgctgag
gtcactcagaaggtcaacatcgaccggtcaaaagacaatgattacccggctgtgcaagtt
gccgtcaagatctccgacgtccgacttcacctgacgcagacccaatattgccttctcatt
gctctcttgcagtccatcccaaaggtcttcgcaaacgtctcagaagtcgaattggattct
cctcagctaccctcccctgtgcccgtgtctgacagccaagcccgcgaacagaccaccgac
gcagtcgcgggggttgaccttcgacccgaaatttccgctcactcctcgtcaggagaagct
cctccatacacttccttggatcttgttgtaacgattggtgccgtgaagttgcatttgtac
gacgcatcggcaacggccccggaggatgtgaaggagcacggcatagcgaggttcgctttg
aacgacaatagtctccgactcaagacgctgtccgacggtgctctcgaggcgcagattgtg
ttgaaatctgtgacgatgagcaatactcgtcctgggaactcgaaattccgggagatcatg
ccagccgcacaacatgaacgcaaccaagtcatgctgctttataccatgtctggtggtcag
gggagtcagagccttgctgtggtcactatcgactctccagaagttattttcgcggtcgac
cccgtcatagcactgctcgagttcttcacgagcgccttcatcgctcagaatggggatccc
gacacggagactgaaagtgtctcgagcccggagacccagacgacgtccacttccagtagc
ctcgatttccggatcgacttgcatgatgcttcagttagtatcctcgaggacgacacgaat
gccgaatcgcaggcaattcgtttgaccgtcaagcagctgcttgtctcacagcagggggta
ttcgcggtgagcgtaaaccatgttggcatgtctcttacgcgcatggggaagccagccgag
agtgtccggttcctcgatgagttggacctcactttcaccctggacagtcgggcttcggaa
gcacatcactccaccagcattgaagttactgcgctgcccgttgtcttccgtgcttcatac
cgggatattatgctcatcatgaccattgtcaacaaagcgattgacctttacggcgaatcg
atccagtcgcaggacgagtcagaacccgacaagactcttactcgaccaggattgacgtca
aggaagatctcgcgacctacaacctcccgtgcacagcccatcgggagtgcacgcgtcatg
atgaacaaggagcagttcaaaggttcattcgagggattccggcttgtcctcattggagat
ctgcacgaacaaccgctcttgcatctgagaatcaagcctttcattcttggggcaaaagat
tggtccggagagctgcaagcaatgtcaacgctctcgatgcacatcagttattggaacatt
gcaaactcgcattgggaacctcttattgatccatgggtgttcaccgcctcggttgcgaag
gagaccccatcgagtggcatcaaggtttctgtcaacgcgaatcagcgcctagatgtcaac
gtgacgttgagctttgtcgagctagtcctggcgtttgcgtctatgcttggcacagaagga
gagcaggtcttgaagaacgcgcgtggcagctatgcgccatacaagatctggaatcgaacg
gggtacccgctgttcatctggtctgacacagagggtagcaatggcaccaaagacaccgct
gccaaacaagttccaaacgggaagacgattgactggcggtttgacgattggaagaccatg
cgagaacatgtctcgtcgagtggacacaacagcattggtgtacagatcgtgggtaagcag
tgggaacatctccgcagcgttccggtagaccgagaaggagagtacacgttctcgctgcgg
ccacgcacgggaaaatacgcacatcgtcttgtctgtgaagtcaaggtagaaggcaacgcg
aaaactgtcgttttgcggtcaacgtacaaagtcgagaacaacacgctctacccgcttgag
ttgaccttggtggatgagactggccagccggtgtatgcggtcgagaagatcgtcccgggt
caagactatgccctccccctcgaggctgtgaaccaatgccgcgtgagggttcagcctgat
cagggcttcggttacaagtggtctccggctgtccgatgggaggatctcattgccaagcgt
ggctttactctccgctgtccacatactgatcagaacgaggccgcattcaggttccaggca
tgggcagaggcagatgcaaatgatatcgcatctcgtaaacttccccgtatttcgcttaag
ctccgagcaccgattgagctcgagaatctcttgccgtacaacctcgagtatcgcatctac
gacaaggataccgaccaaaactggaggagttatctgcgcaagggaggaatcatgccagtc
cactcggttgaactgggacatctcattctgctcaatattcatgtccaggacacagtgttc
aagccaagcgacttcgctatcatcaacaccgacggcaactccgacttcgatgtcgaaagc
aaactggtcctgagagacacccaagggcgtaggttggacctaaagttaaattacatacat
taccccaactcgggtggttctttcaaggtccaggtctatagcccgtacatagtgctcaac
aagactgggttgccatttggtgtgcgcccttcgcgaactcgagtgggtgcgccgtcagaa
attgctggagagacccgtgaggatattctcgcgaagccgcttccattcatgttgtcgcat
cctacggacaacgggaaggacttctcattcaaaatcggcgagtctatgtggtcccagggc
atcagcctcgatgcacctagagcggagaccagactcgtcatgctccaccaacagaacaga
tcagacgagattcacacagggttatcatgggccgagggacttggaaagtacaagctgacg
aaagtgatcactctggcgccgcggtttatcgtcaagaacaacttctctaagcctctagcg
atacgggagcatggcgtggctcctcgcgatcgcgcggcggtggaacccggagagcgccgt
cctctaaacgtcttacgttttggggaggataagttactgacagtggcgcttcctggtctc
aatgcacaatggtccgccccgatcaacttggaggatataggcacgatacacttccgcctt
cctgcgtcggaagacagtcaacagattcgcctgatgcgcgcggatatcaagattgaaggg
cctacgattttcgtgttcttggacgaggcgactgagggatggccgttcaaaatcgagaac
gagagcgacctgactttcactatccaccagacagaccaagctcgtctcaacgcaggccca
ggagccaaacctccaccttcatatactgtggcaccaaagaacagcattgactacgcgtgg
gactatccggctgccagagacaagaaaatcattctcgccgtgaatgggtctcgccgtgac
gttgacatcatggagatcggcgatctcgtgcccttcagagctgctactagccgtggaacg
cgcattgtctcgttggatgtgcgggcggatggtcccaagcaagtcttgcgcatcagcaat
tacaatgcggagctcagtctttacaagccgcggcgccgcagtactgcttcgctaacccgg
caggattcgatgagcagcagtcaggatgcgttcgaagctattcaagagaccgtggctcct
gtgttaaccgtggccttggacttgcacggtattggtgtctccctgatcaacaagcagatg
gtcgaagtggtgtacacgtccctcaacgccctcaagtttgagtacgcaagcaatccggtc
gcacagtctgtcacgctgtcctttggaaatttgcagatcgacaaccaattgcatgatgcg
ctcttccctgtactccttcaacccacaccgatcacgcaagagtccaagagcgtcgcagca
cttcccactgtccaggcgtccttcatctggctgaatgatcaagagcacggcgtgttcttt
atcaagtactgttccgtgcttttgcaagccttaacagtagaagccgacgaagatttcttg
ttcgcactgtatgacctaacgaagatcaagggtgcatcttgggacgtcgctcaggaagat
gttctattcgagaatcccgaagacattccggagccccaagagacgagctctgggctcgac
ctgtacttcgaagtccttgaattgcagcccatcaagctgtcgatatcattcatgcgcaca
gaacggatcagcagcgaggatcaactcatgctgcgcaatcccgcggctgtggtactcaat
gcaatcacaatggctatcggcaacgtcaacgacgcacctttggagatgaacgctcttgct
atcaaggacatgcgattgaccctaccagacctcctgaatcgaatcacgcatcactatcgc
caagaagttctacgacagctttaccgtatcctgggctccgcggacttcattggaaaccct
gtcggcctcttcactaacgtcagctctggtgtcgccgacatcttctatgagccgttcaat
ggtgtcgtcatgcatggtaacaaggatatcggcattgggatagcgaagggtgctgcgagc
tttgtcaagaagacagtgtttggggtctctgacagtttcacaaagttcaccagtagcgtc
gggaaaggcctgtcggcgacaactttcgattctgagtaccagctgcgtagaaggatgaac
cagagacggaaccgacctcgacatgccatctacggtgttgctgccggtgctgaggcgttt
gcaagcagcgtggtcagtggtgtcgaaggagtcgttttgaagccaattgaaggagcagag
tccgaaggagccaagggcttcttcaagggcatgggcaaggggttgattggcgctgtcacg
aaaccagtcatcggagtgttcgacttggcttccaacgtcggcgcaggtatccgtaacact
accaccgtatttgacaaccccgatcgggaccgggtccgtttgcctcgtctgattccagcg
gatggtgtgcttgtgccctattcagaacgcgaagccctgggtcaatactggatgaaagac
ttggaacaaggtgccttccgcggcgagacctacgtcgctcatatcaatcttcctggcggc
gacaatgttgtgctactaacgacgacaaaggtcatctccttctggtccaacaagctcaag
ctggaatgggagctgccgttcacacaggtgcaaggtgtgacaattgaagacacaggcatc
aagttcgcgcacaagggcgggaagcagcacgacaagttcgtcttcatacccgacaagagt
tcccagacatggttcttctctcaggttgcctcggtggtgaaggcattcaatgccagacga
cgcatggactcatag
DBGET
integrated database retrieval system
