Dichomitus squalens: DICSQDRAFT_176739
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Entry
DICSQDRAFT_176739 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
dsq
Dichomitus squalens
Pathway
dsq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
DICSQDRAFT_176739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_176739
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
DICSQDRAFT_176739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ipi1_N
Dopey_N
TOR1L1_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
18840451
NCBI-ProteinID:
XP_007360474
JGI:
176739
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MPKSNKKKKDKAADFAKAKLKLGKGKQAPSNVVDTAFKARSIALPTQSIAIEKDADAPST
KRRLTFDALINHMKHYNATTRRDAILGLRELLEAHRELILAQLTPLINGCVRLVSDEDAS
VRRTLWSFFSWLFRQVPRDDLVPHTPVLLLFTTSAQTHIFPEIRIDAVRFLDIYLEYIPE
IVTEGWMQPGSGSHGRRVMEGYLGILNAGTTFGEGGDVGPVLATSTASVVLSPASKLIVL
KSLESFLSRAVASSWSSKDGSELSSSVLVTPTWYLSSSFASTSAFGAFDALLQPSSFRSG
ADPLRLGDTRVWLPEVSENGGESFVGQFSLLSESCSSAWSFHDLTDVDAAVALLREGQAG
SGTDVEITCVAHLARTLHPTLVSTFLDCAPTVFSPSANPPETELQMVIVFCRICRSLYGR
LLQDSAESGTSHEAAEAELHTILSYLSPYFPFAVNAPNARRDIKIEQAFQDLNLIYCELS
SFLVLASQRDTPPQGSSRKNSRFGRNGRVAPSVPTSTTQARQIERVSVYITQLLRGQAST
SSSQITLPRPITPQAYIALLPTIWSLVNSRHSDIAEPTDSVFSVVAEHAIKASSTSAVKR
HTIDFIGRLLLLDGEREYIGTFKVGNSPEQDLKLEQWILHLPKTLWELGGNNPATTETIV
RLLLRLTQRRSRLLQPSTYSALRSRLIPYFSIAHPTRGKIPGPYAKLPSKSPVRRLVLDL
VATLVGQGNRASSTDDGLAAAVSEAVQDSPESSYWEGC
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagtaacaaaaagaagaaggacaaagccgcagactttgccaaagccaaactg
aagctagggaagggcaagcaagcccccagcaacgtcgtagacaccgccttcaaggcgaga
tccatcgccttacccactcagagcatcgccatcgagaaagatgctgatgcccctagcacc
aagaggagactcacgttcgacgccctcatcaatcacatgaaacattataatgctaccaca
cgcagagatgcaatccttgggttgcgagagctattggaggctcatcgggagctgatcctt
gcacagctcacgccgttgatcaacggttgtgttcgtctagttagcgacgaggacgcgagc
gttcgtagaacactgtggtcattcttctcgtggcttttccgccaagtcccccgagacgac
ctcgtaccacataccccagttctgctacttttcacgacgtcagcacaaacccatatcttc
cctgaaattcgcatagacgctgtccgattcctggacatttacctcgagtatattccagag
attgtcaccgagggttggatgcaacctgggagtggcagtcacgggcggagggttatggag
ggctacctcggcatcttgaatgcaggaacaacatttggggaaggtggtgatgtgggtcca
gttctggcgacatctacagccagtgtcgtcctatcaccggcatcgaagcttatcgtgctc
aagtcccttgaatccttcctaagccgcgctgtggcttcgtcatggagctcgaaggacggg
tcagagttgtctagctccgtactcgttacgccgacgtggtacctttcttcttccttcgca
tccacgtcagccttcggcgcttttgatgctcttctccagccaagctctttccggagcgga
gctgaccccttacggttgggggacactagggtctggttgccagaggtctcagaaaatggc
ggagaatcattcgttggccagttttcacttctctccgagtcttgtagctccgcctggtct
tttcatgacctgacggatgttgatgcggcggtcgcactcctccgggaaggacaagccggg
tcagggactgacgtggagatcacttgtgtcgcgcatctagcacgcacgctacatccgact
ctggtgtcgacatttttagattgcgcaccaaccgtgttttccccaagtgcgaatccccca
gagaccgagctccagatggtcattgtgttctgccgaatatgccgtagcctttacggccgc
ctgctgcaagactctgcggagtcagggacttcgcatgaagccgcggaagccgagttgcat
accatcctctcatacctctctccgtatttcccatttgctgtaaacgctccgaacgctcga
cgcgacatcaagatcgagcaggcgtttcaagacctcaacctcatctattgcgagctttcg
tccttcctggtcctggcttctcaacgagacaccccacctcagggatcatcccgtaagaac
tcccgatttggacgtaacggccgcgtagctcccagcgtacctacgtcgaccacgcaggcg
cgccaaatagagcgcgtcagcgtgtatatcacccagctccttcgaggacaggcatccact
tccagctcgcaaatcacgctaccaaggcccatcacgccgcaggcatatatcgccttgctg
cccacgatttggtctctggtgaacagcaggcactccgatatagcggaacctaccgattcg
gttttttccgtcgttgcagagcatgctatcaaagcttcatccacttcggcagtgaagagg
cacacaatcgacttcatcggaagattgttactgctggacggagaaagggagtacataggc
accttcaaagtgggtaacagccccgagcaggacttgaagctagaacagtggatcttgcat
ctcccgaagacgctgtgggagctagggggcaataacccagcaacgacggagacaattgtc
cggctactccttcgcctcacgcaacgccggtccagactgctgcaacctagcacatactcc
gccttacgatcacgtctaatcccatacttctcaatcgcgcacccgacgcgcgggaaaatc
ccgggaccatacgcgaagttgcccagtaaatcgcccgtgcggcgcctggtgctcgacctc
gtcgcgacgcttgttggtcaaggcaaccgagcttctagcacggacgatggcctcgccgcc
gccgtcagcgaggcggttcaagactctccagagtcgtcgtactgggaagggtgctag
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