Dichomitus squalens: DICSQDRAFT_178021 Help Entry DICSQDRAFT_178021 CDS       T03133                                  Name (RefSeq) hypothetical protein   KO K12830   splicing factor 3B subunit 3 Organism dsq  Dichomitus squalens Pathway dsq03040   Spliceosome Brite KEGG Orthology (KO) [BR:dsq00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     DICSQDRAFT_178021  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dsq03021]     DICSQDRAFT_178021    03041 Spliceosome [BR:dsq03041]     DICSQDRAFT_178021    03036 Chromosome and associated proteins [BR:dsq03036]     DICSQDRAFT_178021 Transcription machinery [BR:dsq03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      DICSQDRAFT_178021 Spliceosome [BR:dsq03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     DICSQDRAFT_178021  Complex B     DICSQDRAFT_178021  Complex C    U2 SnRNP specific factors     DICSQDRAFT_178021 Chromosome and associated proteins [BR:dsq03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      DICSQDRAFT_178021     TFTC complex      DICSQDRAFT_178021 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  18840586 NCBI-ProteinID:  XP_007362085 JGI:  178021 LinkDB All DBs Position Unknown AA seq 1213 aa AA seqDB search MHLYNLTLQPPTAITHAVAGNFSGSRTQEIVVSRGTRLELLRPDVQSGKVATVIASDVFG SIRSLAAFRLTGGTKDYVIVGSDSGRIVILDYDPKTSSFVKVHQETFGKSGARRIVPGQY LATDPKGRSVMIAAMEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGFENP TFAALEVDYSESDQDPSGEAFNNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG GQLATSDRYDGPSGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDPERGLIITAAVMHK MKGAFFFLLQSEEGDLYKVTIEHEEQDVKALKIKYFDTVPVASGLCILKSGFLFVASEFG NHYFYQFQKLGDDDNEPEFSSGDYPSYGMADPTAALPRAYFRPRALDNLTLVDELESLCP ILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEEVVSSDLPGIPNAVWTTKLK EDDPYDSYIILSFVNGTLVLCIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIR HVLSDRRVNEWRVPSGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS TVLALSIAEVPEGRQRTPYLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADM LDAGINKTQPTTFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIRLLRVNIQRNPA ILALSSRPWLNYTHQNFMHFTPLIFENLDYAWSFSAELCQEGLIGISGSLLRIFQIPKLG TKLKQDSIPLSYTPRKLIPHPHNGLLYLIEGDHRVMSEEAAAKQLQQLRESGRAVDEEMV NLPPEQFGRPKAPAGTWASCIRIISPLDAQTVNVIHLDNNEAAFSLAIVPFAAKNNELHL VVGTAQDTFLAPRSCTSGFLRTYRFTDDGRNLELLHKTETNDVPLAIMAFQGKLVAGVGK ALRLYDIGKKKLLRKVENKTLGSTIVTLNTQGSRIIIGDMQESVFYAVYKPPENRLLVFA DDVQPRWVTATTMLDYNTVVASDRFGNVFVNRLDAKISDQIDDDPTGAGILHEKGVLFGA PHKTAMLAHFHIGDIVTSLNKISLVAGGREVILYTCLHGTIGILVPFVSKEDVDLLTTLE QHMRTEQLSLVGRDHLAWRGYYVPVKAVVDGDLCESFAKLPANKQSSIAGELDRTVGEVL KKLEQLRVTASGF NT seq 3642 nt NT seq  +upstreamnt  +downstreamnt atgcacttgtacaatcttacactccaacccccgaccgccatcacccacgcggtcgcgggt aacttctctggctcgaggacgcaggaaattgtcgtgtcgcgcggtacgcgtctcgagctc ctcagaccggatgtgcaaagcggcaaagttgccactgtcatcgcgtctgatgtgtttggc tccatccgttctctcgccgcctttcgtttgaccggtggtaccaaggattatgtgatcgta ggctctgactcgggacggatcgtcatcctcgactatgatcccaagacgagcagcttcgtc aaggtccaccaggagacgttcggcaagtcgggcgcgcggcgaatcgttcctggccagtat ctggccacagacccaaaaggtcgcagcgtaatgatcgcggccatggagaaggcgaaacta gtgtatattctcaaccgagacgctgctgcaaacctcactatctcgtcgcccctggaagcc cacaaaaacaacgcgatcatccaccacatagtcggcctggatgtcggcttcgaaaacccg acttttgctgctctggaggtggattactcggagtcggaccaggacccgtcgggggaggca ttcaacaatgcggagaagatgctcacgtattacgagcttgaccttggtctgaaccacgtt gtgcgaaaatggagcgaacctaccgacccgcgagccaacctgcttgtgcaagtacctggt gggcagcttgcgacttctgatcgctatgacggcccgtctggtgtgcttgtatgctgcgaa gaccacatcatttaccgacacatggatgcgccacaacatcgtgtacccattccgcggagg cgacatccgctcgaggacccggagcgcgggctcatcatcaccgccgctgtcatgcacaaa atgaagggcgcgtttttcttccttttgcaaagcgaggagggtgacctgtacaaggtcacc atcgagcacgaggagcaggatgtgaaggcacttaagatcaagtactttgacactgttccc gttgcgtccggtctatgcattctgaagtctggctttttgttcgtagcgtcagaatttggc aaccactacttctaccaatttcaaaagctcggcgacgatgacaacgagccagaattcagt tcgggagactacccgtcgtacggcatggcggatcccaccgcggcgctgccccgcgcatac ttccgcccccgcgcgcttgacaacctgacgctggtggacgagttggaatctctttgcccg atactagactcgaaggtcatgaacctactgccgaactccgatacccctcagattttcgcc gcatgtggtcgcggggcgaggagtacgttccggacgctccgtcatggtctcgaggtggag gaagtcgttagctctgaccttcctggtattccgaatgctgtgtggacgacgaagctcaag gaggatgacccctacgactcgtacatcattctctcgttcgtcaacggaacgctcgttctc tgcattggggagacaatcgaggaggtccaagacactggtttcctttcgtccgctcccact ctcgctgtacaacagatcggtgcggacgcgctgctccaggtccatccccacggtattcgc cacgtgctttcggaccgtcgcgtaaacgaatggagggtaccctccggcaagaccattgta tgtgcgacaacgaacaagcgtcaggtggtggtcgcgctcagctccgccgagctggtatac tttgagttggaccttgatgggcagttgaacgagtaccaggacaggaaggcgatgggtagc actgtccttgctctgagtatcgcggaggttcccgagggccgtcagcggacgccgtacttg gctgtgggctgtgaggaccaaaccgtccgtatcgtgtctctcgaccctgagagcacacta gagacgatcagcctacaagccctgactgcaccgccgtccgcgatctgcatcgccgacatg ctggatgcgggcatcaacaagacgcagcctacgaccttcgtcaacatcggtctccagaac ggcgtcttgctccgtacggtgcttgaccccgtcaacgggcagctgactgacacccgcacg cgcttcctcggcactcgtccaatccgcctcctgcgcgtgaacatccaacggaaccctgcg atcctcgcgttgtcttcgcgcccgtggctcaactacacacatcaaaatttcatgcacttc acgccgcttatcttcgagaacttggactatgcttggagtttctcggcggagctgtgccag gagggtctgatcggtatatcggggagcttacttcggatattccagattccgaagctgggt acaaagctcaagcaggactcaataccgttgtcgtacacgccccgcaaattgatccctcac cctcacaatggactcctatatctcatcgagggtgatcaccgggtgatgagcgaggaggct gcggcgaagcagttgcagcagttgcgggaaagtggtcgggcagtcgatgaggagatggtg aacctgcctcccgagcaatttggacgaccgaaggcgcctgcgggtacttgggcctcgtgt atacggatcattagtccgttggacgctcaaacggtcaacgtcatccacttagacaacaac gaagctgcgttctcgctggcaattgtcccgttcgctgcgaagaacaacgagcttcatctt gtcgtgggcaccgcgcaggatactttcctcgctccgcgctcatgtacgagcggctttttg aggacgtatcgcttcaccgatgatggtaggaacttggaactgctgcacaagaccgagacg aacgatgtgccattggctatcatggcgttccagggaaagttggtcgctggcgtaggaaag gccttgcgattgtatgatataggcaagaaaaagctactccgtaaagtggagaacaaaaca ctcggctccaccatcgtcacactgaatacgcaagggtcgaggatcatcatcggcgacatg caagagtcagtcttctatgccgtgtataagcctccagaaaatcgcctgctcgttttcgcc gacgatgtacaaccccgctgggtcactgcgacaactatgctggactacaacaccgtggtc gccagcgatcgcttcgggaatgtttttgtcaaccgcctagacgccaagatctctgaccag atcgacgacgacccgacaggtgccggtatcttgcatgagaagggtgtcctgtttggtgcg cctcacaagactgccatgctcgcgcacttccacatcggcgatatcgtcacctccctcaac aagatttcgctcgtcgccggtggccgcgaggtcatcctttacacctgcctgcacgggaca atcggcattctcgtgccgttcgtgtcgaaggaagacgtcgacctactcacgactctcgag cagcacatgcggacggagcagctcagtctcgtcggacgcgaccatctcgcatggcggggg tactacgtgcccgtcaaggccgtcgtcgacggggacctatgcgagtcgtttgcgaagttg cccgccaacaaacagagctcgatcgccggcgagcttgatcggacggtgggtgaggtgctc aagaagctcgagcagttgcgtgtcaccgcgagcggattctga

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