Dichomitus squalens: DICSQDRAFT_178625
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Entry
DICSQDRAFT_178625 CDS
T03133
Name
(RefSeq) Vps5-domain-containing protein
KO
K17917
sorting nexin-1/2
Organism
dsq
Dichomitus squalens
Pathway
dsq04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DICSQDRAFT_178625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsq04131
]
DICSQDRAFT_178625
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dsq04990
]
DICSQDRAFT_178625
Membrane trafficking [BR:
dsq04131
]
Endocytosis
Macropinocytosis
Sorting nexins
DICSQDRAFT_178625
Domain-containing proteins not elsewhere classified [BR:
dsq04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
DICSQDRAFT_178625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
Arfaptin
BAR_3
DUF6854
BAR_3_WASP_bdg
CLZ
DUF2764
Motif
Other DBs
NCBI-GeneID:
18840657
NCBI-ProteinID:
XP_007362924
JGI:
178625
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MDNGFDDLLAPSRDVMDNPFGDPFAQGRSSSPDPWASFGTAAAVPSFNEESLAFGGNSIS
PTTLTHNAFADVGGFQDHEPQDYQSHDYGSEEPPHTQVDENKPHEEEAPASPADPLDTAA
FNAAEAVAEAEEAAAAAASTGLPTGLPTYQSRGFRESISTETDEPVKLAEPEPRRSPTPP
AEQRQPPLPKPSSPPPPPERRTDVPAPSRTLGHGSRASTASFSSSHKVEPASFNPLDQPA
SSLNRSIAGLSIGGEALGGWQSPGGGWQTQTSYSVPGPAVSAAQNQNVSDDDDDDDRPIA
ETMAARAARSASPSTSVSTPAPAKRENGIQPVFVITVDDPQRVGDPIRAYTMYTVHTKTT
SPMYKKSSFSVLRRYSDFLWLYETLSLNNPGVVVPPVPDKNPFARFDEDFVQQRRLALEK
CIQKIANHPVLQKDHDLKLFLESDTFALDIKHRKAELAQEKGGLMAALGQTIAGPRFYET
DEWFDRQKAYLDSLETQLRGLVKAIDAVAKQRAEVSAAAAEFAQAIADLAACDVGSQLAV
TLSGLADVERKAQELQNIQASEDVMTVLATADEYARLINSVRLAFSSRVRIYHAWQSADA
HLRRTKQTHESNRAQGRLGPDQLSRSLAIVGEAERRALDAKQEFDHVSRLVKSEVARFEQ
ERIEDFKNALEAFLEGMIKRQKQLIASWESYQQSLLKRFAPQSQQRPPDSPVSVSAS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggacaacggctttgacgacctgctcgcaccctcacgagacgtcatggataaccccttc
ggcgaccccttcgcacaaggcaggtcgagctcgccggacccttgggcgagctttgggacc
gccgctgcagtgccctctttcaacgaggagtctctcgcgtttggagggaacagcatctcg
cccacgacgctcacgcacaacgcgttcgccgatgtcgggggattccaggaccacgagccg
caggactaccagagccatgattacgggtcagaggaaccaccccatacgcaggtcgacgaa
aacaagcctcatgaagaggaggcgccggccagccctgcagaccctctggacactgcagcc
ttcaacgccgcagaggcagtagcggaggcggaggaggcggcggcagcagccgcgtccaca
gggctccccacaggcctgccgacctaccagtcgcgcggcttccgcgagagcatctccacc
gagaccgacgagcccgtcaagctcgcagagcccgagcccaggcgatcacctacgccccct
gccgagcagcggcagccccccttaccgaaaccctcctccccgcccccgccccccgagcgt
cgcacggacgtaccggcaccgagtcgcacgcttgggcacggctcgcgcgcctccaccgcg
tccttctcgtcctcgcataaggtggagccggcgtcgttcaatccgctcgaccagccggcg
tcctcgctcaaccgctccatcgcggggctctcgattggcggcgaggcgctgggcgggtgg
cagagtccgggcggcggatggcagacgcagacgtcgtatagcgtgccggggcctgcggtg
tcggcagcgcagaaccagaacgtatcggacgacgacgacgacgatgaccggcctattgcg
gagactatggctgcgagggctgcgaggtcggcttcgccttcgacgtcggtatcgacgcct
gcccctgcaaagagggagaacggcattcagcctgtgttcgtgatcaccgtcgacgaccct
cagagggtaggggaccctatccgcgcatataccatgtacaccgtccataccaagacaacg
tcgcccatgtacaaaaagtccagcttctcggtgctgcggcggtactccgacttcctctgg
ctgtacgagacgctgtcattgaacaatcctggggtggtcgtccccccagtcccagacaag
aaccccttcgctcgctttgacgaagactttgtgcagcagcgacggctcgccctcgagaag
tgcatccagaagatagccaaccaccctgtgctccagaaggaccacgacttgaagcttttc
ctggagagcgacacatttgcacttgacatcaaacatcgaaaagctgagctagcccaggag
aagggcggcctcatggctgctctcggccaaactatcgctggcccccgcttttacgagaca
gacgagtggttcgacaggcagaaggcgtacctagacagcctagagactcagctgcgcggg
ctcgtcaaagcgattgacgcggtggcgaagcaacgggctgaggtgtctgctgccgctgcc
gagttcgcccaagctatcgctgaccttgcagcgtgtgatgttggcagccaactggcagta
acactatctggtctcgcagacgttgaaaggaaggcccaggagctgcagaacatccaagca
agcgaagacgtcatgactgttttggctacagcggacgaatatgcacgcttaatcaactct
gttcggctcgccttcagctcccgcgttcgtatatatcacgcttggcaaagtgcagacgcg
catctccgacgcacgaagcaaacacacgagtcgaatcgcgcgcaagggcgccttgggcca
gaccagctcagccgctcgctcgccattgtcggggaagccgagcggcgtgcgttggacgcg
aagcaggaatttgaccatgtctcgcgcctcgtgaaatccgaggtggcgcgcttcgagcag
gaacgtatagaggacttcaagaacgccctggaggcgttccttgaaggaatgatcaagcgg
cagaaacagctgatcgcgtcatgggagagctaccagcagtctctactgaagcgcttcgcg
ccgcaaagccagcagcgccccccggactccccggtttctgtgtcagcttcatga
DBGET
integrated database retrieval system