Dichomitus squalens: DICSQDRAFT_178906
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Entry
DICSQDRAFT_178906 CDS
T03133
Name
(RefSeq) SHMT-domain-containing protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dsq
Dichomitus squalens
Pathway
dsq00260
Glycine, serine and threonine metabolism
dsq00460
Cyanoamino acid metabolism
dsq00630
Glyoxylate and dicarboxylate metabolism
dsq00670
One carbon pool by folate
dsq00680
Methane metabolism
dsq01100
Metabolic pathways
dsq01110
Biosynthesis of secondary metabolites
dsq01200
Carbon metabolism
dsq01230
Biosynthesis of amino acids
dsq01240
Biosynthesis of cofactors
dsq04981
Folate transport and metabolism
Module
dsq_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DICSQDRAFT_178906
09102 Energy metabolism
00680 Methane metabolism
DICSQDRAFT_178906
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DICSQDRAFT_178906
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DICSQDRAFT_178906
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DICSQDRAFT_178906
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DICSQDRAFT_178906
Enzymes [BR:
dsq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DICSQDRAFT_178906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DUF5768
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
18840694
NCBI-ProteinID:
XP_007363329
JGI:
178906
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MFRLLSRPLRATTLLRAPIHRTMANTPDFNKGLYAPLAEIDPEVQNIIDKETWRQFSGLE
LIASENLTSRATMEANGSILTNKYSEGLPNARYYGGNEYVDELELLCQKRALQAFHLDPA
QWGVNVQPYSGSTANFAALTALIQPQDRLMGLGLPDGGHLTHGYYTAKKKMTASSIYFQS
LPYSLDPETQLIDYKGVAKLAKIYKPRLLICGASAYPRDWDYKILREIADEHGAYLMADI
AHTSGLVAAGELADPFQYCDVVTTTTHKTLRGPRAGLIFFKRDSDKAKDLEKRVNDAVFP
ACQGGPHNNTIAGIATALHQACQPTWKAYAKQVIANATTLGKELVARGYKLQTSGTDNHL
VLWDLRPLGLTGSKLEKLCDIVGITINKNAVSGDTNAQVPGGIRLGTAALTSRNMTEDDM
KVVADFLHRAVQLSLTLQKEAGSKLLKDFVRVATTPADGKVGAQQVAGLRKEVREFARRW
PLPGVDVSTLTRPAGIEADD
NT seq
1505 nt
NT seq
+upstream
nt +downstream
nt
cgatgttccgccttctctctcgccccctccgtgccaccaccctactccgcgccccgatac
acagaacgatggccaacactccggacttcaacaagggcctctacgcgccccttgcagaga
ttgatcctgaggtgcagaacatcatcgacaaggagacatggaggcagttctctggcctcg
agctcatcgcgtctgaaaacttgacgagccgcgcgacgatggaggccaacggctcgattc
tcactaacaagtactcggagggtctccccaacgcacggtactacggcggcaacgagtatg
tcgacgagctcgagctcctctgccagaagcgcgctctccaggcgttccacctcgaccccg
ctcagtggggtgtcaacgtccagccttactctggttctacggcgaactttgcggccctca
ctgctctcattcagccccaggaccgtttgatgggtcttggtcttccggatggcggtcact
tgacgcacgggtactacaccgcgaagaagaagatgactgcgtcttccatctacttccagt
ccttaccctattcactcgaccccgagacgcagcttatcgactacaagggcgtcgccaagc
tggccaagatctacaagccccgtctgcttatctgcggtgcctccgcgtacccccgcgact
gggactacaaaattctccgcgagatcgccgacgagcatggcgcgtacctcatggctgaca
tcgcgcacaccagcggtctcgtcgccgctggggagctcgcggatcccttccagtattgtg
acgtcgtcaccaccactacgcacaagactctccgcggtccgcgtgctggtctcatcttct
tcaagagggattcggacaaggcgaaggacctcgagaagcgcgtgaatgacgctgtgttcc
ctgcgtgccagggtggtcctcataacaacaccatcgctggtatcgctactgccctccacc
aggcatgccaacctacctggaaggcgtacgcgaagcaggtcattgcgaacgcaacgacgc
tcggcaaggagctcgtcgcccgcggctacaagctccagacatccggcacggacaaccacc
tcgtcctctgggacctccgcccgctcggcctcactggctcgaagcttgagaagctctgcg
acatcgtcggcatcaccatcaacaagaacgccgtctcaggtgacacgaatgcccaggtcc
ccggcggcatccgcctcggcaccgccgcgctcacgtcgcgcaacatgaccgaggacgaca
tgaaggtcgttgcggacttcctccaccgcgccgtccagctttcgctcacgctccagaagg
aggcgggcagcaagctcctcaaggacttcgtccgcgtcgcgaccacgcccgcggatggta
aggtgggcgcgcagcaggtcgccggcctccgcaaggaggtccgcgagttcgcgcgcaggt
ggcccctccccggcgtcgacgtctcgacgctcactcgtcctgccggcatcgaggcggatg
attag
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