Dichomitus squalens: DICSQDRAFT_179268
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Entry
DICSQDRAFT_179268 CDS
T03133
Name
(RefSeq) TAF-domain-containing protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
dsq
Dichomitus squalens
Pathway
dsq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DICSQDRAFT_179268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_179268
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_179268
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DICSQDRAFT_179268
Coactivators
SAGA/TFTC/STAGA complex
DICSQDRAFT_179268
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
DICSQDRAFT_179268
STAGA complex
DICSQDRAFT_179268
TFTC complex
DICSQDRAFT_179268
SAGA complex
DICSQDRAFT_179268
SLIK complex
DICSQDRAFT_179268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
Bromo_TP
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
18840733
NCBI-ProteinID:
XP_007363817
JGI:
179268
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MNKQAPKARPAPAKVPGIYKVDSVRDVAESLNLPNLPDAVASALASDVEYRIQQVVEEAA
RFMRHAKRTTLTTADIDQALRVLNIEPLYGHFPHNPPAFRRALPFPQMQTAGSVYFVEDE
EIEFDRVIREEKISMPKGVSWTAHWLAVEGVQPLIPENPPAAPREIDPDSAAAKTGTANG
VSGSVFPLTPPSSDRPSPIQSSKQTQQQNILVKQTLSRELQLYYTRLTSSLLPPTSDPAK
RTAALASLRHDAGLSPLLSYLVHWVGEGVVNTLRGGSQTETDGKLLEVYLDVIAALLDNQ
TLGVEPYLHQILPSVFSILLYSSLPPSNAIHLRTTAAQILAHLLTHYSMTYPGLPTKIVK
TLIVGLIDNKKSRATHEGAIRGLMAIGKEALRQGLVNRSGARTVGEKCMPGESSQLVELV
MDGLKLIHPPSAHPVPLDPNSSADSELIEKLHATLGDFFAERVVSDAEWARGILSDEASV
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaagcaccgaaggcgcgacctgcaccagccaaagtacccggcatatacaaa
gtcgactcagtccgcgatgtagcggagtcactgaatttaccaaacctaccagatgctgtg
gcctccgcgcttgcgagcgacgtcgagtatcgaatacaacaggtagtcgaggaagccgcg
cgatttatgcgacacgcgaagcgcaccaccctcacgacagccgacattgatcaagctcta
cgcgtcctaaacatcgagcctctctacggccacttcccgcacaaccctccagcgttccgc
cgggccctcccttttccccaaatgcagaccgcgggctcggtgtactttgtcgaagacgaa
gagatcgagtttgaccgcgtcatacgcgaagagaagatctccatgcccaaaggcgtcagc
tggacagcgcactggctcgcagtggagggcgtccagcccctcatccctgagaacccgcct
gccgcccctagagagattgaccctgacagcgcagcagcgaagaccggtacagcgaatggt
gtctccgggtcagtgtttcctctcacaccaccatcctccgaccgcccctcgccaatccag
tcgagcaagcagacacagcaacaaaatatcctcgtcaagcagacactttcgcgagagttg
cagttgtactacacgcgtctcacctcgtcgctgcttccccccacctccgatcctgcaaag
cgaactgccgcacttgcaagtctgcggcacgacgcgggtttgtcgccactcttgtcgtat
ctcgtgcattgggtcggagagggtgtggtcaatacacttaggggtggctcgcagacggaa
acggatgggaagttgttggaggtctacctggacgtcatcgccgcgcttctagacaaccag
acacttggtgtggaaccatatctccatcaaatactgccctccgttttctccatcctgcta
tactcttccctaccaccatccaacgccatccacctccgcaccacagcagcccagatcctt
gctcacctcctcactcactattccatgacataccccggcctcccgaccaaaattgtgaag
acattgatagtaggcctcattgataacaagaaatcgcgagcgacgcacgagggcgctatc
cgcgggctaatggccatcgggaaggaggccctacggcaagggctcgtgaaccgcagtggc
gccagaactgtgggcgagaagtgtatgcccggcgagtcgagtcagctcgtcgagctcgtc
atggacgggttgaagttgatccacccaccgtctgcccatcccgtccccctcgacccgaat
tcgagcgcggacagcgagctcattgagaagctccacgcgacactaggcgacttcttcgcg
gagcgcgtcgtgtccgatgccgagtgggcgcggggcattctttcggacgaggcttccgtt
ctgtag
DBGET
integrated database retrieval system
