KEGG   Dichomitus squalens: DICSQDRAFT_180340
Entry
DICSQDRAFT_180340 CDS       T03133                                 
Name
(RefSeq) histone-fold-containing protein
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
dsq  Dichomitus squalens
Pathway
dsq03030  DNA replication
dsq03082  ATP-dependent chromatin remodeling
dsq03410  Base excision repair
dsq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DICSQDRAFT_180340
   03410 Base excision repair
    DICSQDRAFT_180340
   03420 Nucleotide excision repair
    DICSQDRAFT_180340
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    DICSQDRAFT_180340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsq03032]
    DICSQDRAFT_180340
   03036 Chromosome and associated proteins [BR:dsq03036]
    DICSQDRAFT_180340
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_180340
Enzymes [BR:dsq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DICSQDRAFT_180340
DNA replication proteins [BR:dsq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    DICSQDRAFT_180340
Chromosome and associated proteins [BR:dsq03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    DICSQDRAFT_180340
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      DICSQDRAFT_180340
SSDB
Motif
Pfam: CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 18840858
NCBI-ProteinID: XP_007365241
JGI: 180340
UniProt: R7T0V6
LinkDB
Position
Unknown
AA seq 250 aa
MPRAKESTAGASTAQAQQDAVSEGIDNFELPRSLIMKLARASQVPETTKFSKDSMLSILK
CSTVWVNYLAATAHEVASSKQHKSISATDVVKALELVEFPDIAKVVQAELPTYRETQRAD
KRKGGAKAKAKDTSESASAASKPRGKGKAAAASEPQQPIPPIHIRPSSSASAAHTAADPS
SEVAEDVDEDQEMQDPDQDQEEEAVEDVDEEMDDEELGDEEEPEDTMALEDEELRRDAKG
LDAQHALEED
NT seq 753 nt   +upstreamnt  +downstreamnt
atgcctagagcaaaggagtcaacagcgggagcgtcaacagcccaagcccaacaggatgcc
gtctcggaaggcatagacaacttcgagctgccccggagtctcatcatgaagctcgcgcgc
gcgtcgcaggtaccggaaaccacgaagttctccaaagattcaatgctgtccattctgaag
tgttccaccgtgtgggtgaactaccttgctgcgacagcacacgaagtcgcgagctcaaaa
cagcacaagagcatctccgccaccgatgtcgtcaaagcgctcgaactcgtcgagttcccc
gacatcgctaaggtcgtccaagcagagctgcccacgtaccgtgagacacaaagggcagac
aagcgaaaaggcggcgccaaggcaaaagcaaaggacacgtccgagtccgcgtccgccgca
tcaaaacctagaggcaagggcaaggcagcggccgcgtccgagccccagcaacctattccc
ccgatccatatccgcccttcctcctccgcgtctgccgcgcacacagctgccgatccgtcg
tcagaggtcgcagaagacgtcgatgaggaccaggaaatgcaggatccggatcaagatcag
gaggaggaggcggtagaggatgtcgacgaggagatggatgacgaggagttaggggatgag
gaggagcctgaagatacgatggcactggaggacgaggagctacggcgagatgcgaagggg
cttgacgcccaacatgcgttagaggaggattga

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