KEGG   Dichomitus squalens: DICSQDRAFT_180809
Entry
DICSQDRAFT_180809 CDS       T03133                                 
Name
(RefSeq) epsilon DNA polymerase
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
dsq  Dichomitus squalens
Pathway
dsq03030  DNA replication
dsq03410  Base excision repair
dsq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DICSQDRAFT_180809
   03410 Base excision repair
    DICSQDRAFT_180809
   03420 Nucleotide excision repair
    DICSQDRAFT_180809
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsq03032]
    DICSQDRAFT_180809
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_180809
Enzymes [BR:dsq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DICSQDRAFT_180809
DNA replication proteins [BR:dsq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    DICSQDRAFT_180809
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      DICSQDRAFT_180809
SSDB
Motif
Pfam: DNA_pol_E_B BTB_3 DNA_pol_D_N
Other DBs
NCBI-GeneID: 18840924
NCBI-ProteinID: XP_007366015
JGI: 180809
UniProt: R7SYQ6
LinkDB
Position
Unknown
AA seq 542 aa
MADRRHVIIKVFRKYGHSLGPESLEFLEDLLDRHDIADEEVEYSIEWMAQEYNKQDDAQM
KVSLDVLQRVYETFQNGDNNEDEGHSQLDSDSHLFFIDAYEMPLWNWSVERSTFERAQGT
LTASGSADSRVFAARNRLNVIKQCVLRNDHFSPSTLPSKDRQNLLTLKSTKQLLGRAGDR
FLLFGMLTHSKEGKLCLEDQDGAVELDFSQLEQPSEGLFTEGCFALVEGDYTEDATLLVI
AIGHPPCESREAARSIYGHIDFLGRGATTLLEDKQFASRVQLELPDLRFFVLSDVWLDKP
DTLLGLRKMFDNCMENSFIPKVIVLCGNFTSVGIPQGNGRELRKYQDNFEALADLITSYP
LLTRTTHFVLVPGPLDVTINSVLPRRPILSSFVSRLKSRVPNVHFASNPCRIKFFEQEIV
IFREDLMSRMLRNLVGVKPDVKNDDLERYLVQTILDQSHLMPVTTSIQPTLSELDHALRL
YPLPTAVVLADKYERYQMTYEGCHVFNPGRFVGNTFTFSAYAPARRESEECVLDLDPEEG
WS
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggctgatcgtcggcatgtcatcataaaggttttccgtaaatatggccattcgctcgga
cccgaatctctggagttcctggaagacctgctcgaccgacatgacatagcagacgaggag
gtcgaatactctatagaatggatggcacaagagtacaacaagcaagatgacgcgcagatg
aaggtatcgctcgatgtcttgcaacgagtatacgaaacgttccagaacggtgataataac
gaggatgaaggccactctcaactcgactccgatagtcatctcttcttcatagatgcatac
gagatgcctctgtggaactggtctgtggagcgcagcaccttcgaaagagcgcagggtacc
ctgaccgcgtcaggttcggctgattcaagagtcttcgccgctcgcaaccgtttgaatgtc
ataaaacaatgcgtactgcggaacgaccacttctcaccatcgacattgccttctaaggat
cgccagaacttattgacgcttaaatcaacgaaacaacttcttggacgtgctggagaccgg
ttcctactctttgggatgctcacgcattcgaaggagggtaagctttgtcttgaggaccaa
gatggtgccgtcgagctcgacttttcgcaactagagcaaccaagtgaagggctgttcacc
gaaggatgtttcgccttggtggagggcgattacacggaagacgccacactgctcgtcatc
gctatcggtcatccgccttgcgaaagccgagaagccgcgcggtcgatatacggacacatt
gacttccttggtcgcggcgcgacgacgctgcttgaagacaaacaattcgccagtcgggtt
caactagagctgccggacctgcgtttctttgtactctccgatgtgtggcttgataaacca
gacacccttttggggctccgcaagatgttcgataactgtatggagaacagcttcataccc
aaagtgattgtgctttgcgggaacttcactagcgtcggcattccgcaagggaacggtcgt
gaactccgtaaatatcaagacaacttcgaggctctggctgacctcattacgagttaccct
ctgctgacccggacgacgcacttcgttctggttcctgggccgctggacgtcaccatcaac
tccgttctgcctcgcagacctatactttcctccttcgtgtcccgcttgaagtcgcgcgtg
cccaacgtccactttgcaagtaacccatgtcggatcaagttcttcgagcaggagatcgtt
atattccgggaggacctcatgtcgagaatgctcagaaacttagtcggtgtgaaaccggac
gtcaaaaatgacgatctcgagcgctatcttgtccaaacaatcctagaccaaagccatctg
atgccggtaacgacgtccatacagcctaccctgtctgaattagaccatgccctccggctt
tacccccttccgactgctgttgttctggccgacaaatacgagaggtaccagatgacctac
gaaggctgccatgtcttcaatccagggaggtttgtgggtaacaccttcactttctccgcg
tatgcaccagccagacgagagtcagaagaatgcgttttggaccttgatccggaggaaggg
tggtcatga

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