Dichomitus squalens: DICSQDRAFT_183024
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Entry
DICSQDRAFT_183024 CDS
T03133
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_183024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_183024
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_183024
Enzymes [BR:
dsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DICSQDRAFT_183024
Spliceosome [BR:
dsq03041
]
Complex A
U2 snRNP components
U2 related factors
DICSQDRAFT_183024
Complex B
DICSQDRAFT_183024
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
DICSQDRAFT_183024
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
90S particles
Helicases
DICSQDRAFT_183024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
SRP54
AAA_22
AAA_19
T2SSE
nSTAND3
Flavi_DEAD
TrwB_AAD_bind
CCCAP
ABC_tran
ATPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
18841271
NCBI-ProteinID:
XP_007369556
JGI:
183024
UniProt:
R7SNR1
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MGVDNPYTNAPPIGANPLHGFLPRKVTAEQVIRAMESDVNPFNKQPHKPQYKKILEGRKK
LPVFGQMAEFLKIFTENQIIVMVGETGSGKTTQIPQFVCYSDLPHTKGQMVACTQPRRVA
AMSVAKRVADEMDVSLGKEVGYSIRFEDMTEPGTTFLKYMTDGMLLREAMNDPDLKRYST
IILDEAHERTLATDILMGLLKDLARRRSDLKLVVMSATLDAQKFQKYFSIAGPSKPAPLF
KVPGRTHPVEVFYTQEPEPDYVEAAIRTVLMIHRAEEPGDILLFLTGEEEIEDACRKIKL
EADDLVNQDPESVGPLVCVPLYSSLPPQQQQRIFDPAPPPRVSNGPPGRKVVVSTNIAET
SLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYT
EKDFMTELEEQTHPEILRSNLANAVLELAKLGVKDLVHFDYVDAPAPETLMRALELLNYL
AALDDEGNLTPLGAIMADFPLDPQMAKMLIVSPEFNCSNEILTIVAMLSVPNVWLRPPNQ
RKEADAAKALLTIPDGDHLTLMNVYNSYMNNKHDRNWCWNNYLSGRALQQAENVRSQLQR
TMERYEVELVTTQDERKLWQSIRKALVCGFFMQVAHKEGEKGGYLTVKDNQVVSLHPSCG
LDSSPEWVIFNEFVLTTKPYIRTVTEVRPEWLLEYAPNYFDLSTFPEGETKRALQRVLKK
RSLKAVDGNGTGSPSNRSNSPAGSEPAKKKSKKQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggagtggataacccgtacaccaacgcccctccgattggcgcaaatcctcttcatggc
ttcctccctaggaaggtcaccgcagagcaggtcatcagagccatggagagcgatgtgaat
ccgttcaacaagcagccccacaagccccaatacaagaagatcctcgagggtcgcaaaaag
cttcctgtctttggccagatggccgagttcttgaaaatttttaccgaaaaccagattatc
gttatggtcggtgagactggttcgggaaagacgacacagatcccgcagtttgtctgctac
tcggaccttccacacacgaagggtcaaatggtcgcatgtacacaaccaagacgtgtcgct
gcaatgtccgtcgctaagcgcgttgcagacgagatggatgtgtcgcttgggaaggaagtc
ggctactcaatacgtttcgaggacatgaccgagcctggaacgaccttcctgaaatacatg
accgacggtatgcttctccgagaagcaatgaacgatcctgacctcaagcgatactcgact
atcatcctcgatgaggcccacgagcgtacattggccacagatattctcatgggtttgttg
aaggacctcgcaagacgtcggtcggacttgaagcttgtggtcatgtcggccactctcgac
gcgcagaaattccagaagtacttcagcattgccggacctagcaaacccgcgccactgttc
aaggttcctggtcgcacacatccagttgaggtcttctacacgcaggagcccgaaccggac
tatgtggaggccgctatacgcacagttctcatgatccatcgtgcggaagaacctggcgat
atcctgcttttcttaacaggtgaagaggagattgaggacgcatgtcgtaaaatcaaactc
gaagcggacgatctcgtcaaccaagatccggagagcgtcggcccactcgtctgcgtcccc
ctctactcctccctccccccacaacagcagcaacgcatctttgaccccgcacccccaccc
cgtgtatccaacggtccgcctggtcggaaggtcgtcgtgtcgacgaacatcgctgagacg
tcgctcacgatcgacggtatcgtctatgttgttgaccctggtttctccaaacaaaaagtg
tacaacccgcgtattcgcgtcgaatctttgctcgtatctcctatctccaaagcttctgca
cagcagcgtgcgggacgcgctggtcgtacacgaccgggcaagtgtttccggctgtatacg
gagaaggacttcatgaccgagctcgaggagcagacgcaccccgagatcctccggagcaac
ctcgcgaacgccgtgctcgagctggcgaagctgggtgtcaaggatttggtgcacttcgac
tacgtggacgcgccagccccggagacgctcatgcgtgccctggagctgctcaattatctc
gctgcgctagatgacgaagggaacctgacacccctcggcgcgattatggcggactttcct
ctcgaccctcagatggcaaagatgctgattgtcagccccgagttcaactgcagtaacgag
attctgaccatcgtggccatgctttccgtgcctaatgtctggcttcggccaccaaatcag
cggaaagaagcagatgctgctaaggcgcttctcacgattccggatggagaccatctgacg
ctgatgaacgtgtacaattcgtacatgaacaacaagcacgataggaattggtgctggaac
aactacctgtcggggcgggcgctgcagcaggcggagaacgtccgctctcagttgcagcgg
acgatggagcggtatgaggtcgaactcgtcacaacgcaggacgagcggaagctgtggcaa
agcatcaggaaggcgctcgtgtgcgggttcttcatgcaggtcgcgcacaaggaaggcgag
aagggtgggtacctgacggttaaggacaaccaggtcgtgtcgctgcacccgagctgcggc
ctggactcgtcaccggagtgggtgattttcaacgagttcgtgttgacgacaaagccgtac
atccgaacggttaccgaggtgcggccggagtggctgttagagtacgcgccgaactacttc
gatctgtcaactttcccggaaggcgagacgaagcgggcgctgcagcgcgttctgaagaag
cgctcactcaaggccgttgacggcaacgggaccggcagtccgtccaatcgcagcaatagt
cccgctggctcggagcccgcaaagaagaagtcgaagaagcagtag
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integrated database retrieval system
