Dichomitus squalens: DICSQDRAFT_48412
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Entry
DICSQDRAFT_48412 CDS
T03133
Name
(RefSeq) Utp14-domain-containing protein
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
dsq
Dichomitus squalens
Pathway
dsq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DICSQDRAFT_48412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_48412
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DICSQDRAFT_48412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
18842113
NCBI-ProteinID:
XP_007359957
JGI:
48412
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MARGRASGKFTTSSRPSRKAANALGYAKRQSLKSNTLSSGLSDVYEYQQEKVRRAKIKPL
LERDETTGMGAADSGGEEEGAGGRRRDTRPRLIGENDDDEGIAEEDDEEIDSDEAFEESD
EERFAGFSFSQKAKERSKPKRKAPAKTRAVRFVDVDLNEDDVEEAEGVAEDDSSSEDGDE
EEEQEEEGDPSEFIDVLDVLDGRGESDSETGMGKAEREDQARRTAAGSGEEFDTDGDEDM
EDSAEEDDDDEEEDEEEEAKIVSASEDEGEDGDDALQELESFVTGLDAGHKRKAPDDDDA
AVDGADSKPARKRRLLPELTEAGVENEFAATTGDGKLSLDDLLAPLEGGQSANLQSLRKS
AKVLASTGGKIKTLSAPLPQRTAERLDREAAYEQTKEEVDKWKVTMQRIKEAEHLSFPLQ
AEPKSRTSNLELAAKFKAGLQHAVDKLLKSAKMREDEIAQTESLKLNHLSVEEVAARRAE
LAKMRDLMFRAEAKAKRIAKIKSKTYRRIKKKERARLAEKLGEGSDDDLDDEEARLKREV
ERARERATLRHKNTGKWAKAMRARGELDEDQRRDINEMLDRGEKLRRKIQGQGESDEESG
DESDDGDDGESFAHIKAKAFDELAALDAEQPEAPEGKKSKSIFEMKFMKDAMAREQRKAK
EIADDFVKEMGSDHGDDGEDVDVDVQQVAEEPLNVTVQRTGGRVVYRPGVMTSGMRPAGS
LASDTSSVTLKSTDVPPEGLPEQSASPPGSPVSQRRVPSPAAEVNPWLAQASSSSKGLTK
HEVAVSKESAAVEKSRNKLRKRQQKRLEEKVKAQEDAEVDISLSTVMTLSEPSKASEPSK
VTALKSAPAADGKAKATSAADEDSDSDVNSELEEQERAAARKSKGKGKANGVKAFEQRDL
VALAFAGDNVVQDFAEAKRREMAEDAPKEIDNTLPGWGSWGGAGTKKAAPKPHLIKKVAG
IDPKSRADYKKAHVIISEKRDKKAAKYLVKDLPYPYTSKAQFERSMEVPLGTEWNTRLGF
QRATLPKVVTKMGTLITPLEKLS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggccaggggtagagcctctggaaagtttaccacctccagccggccatcgcgcaaggcg
gcaaatgcactcggttatgcgaagcggcagagtctgaagtccaatacgttgagctctggg
ctctcggacgtgtacgaatatcaacaggagaaggtccgtcgtgcaaaaatcaagcctttg
ctggagagggatgagacaacgggaatgggcgcggccgatagtgggggcgaggaggagggt
gcaggagggaggaggagggacacaaggcccaggctcattggagaaaacgatgacgacgag
ggtattgcggaggaagatgatgaggagatcgacagtgatgaagcgttcgaggagagcgat
gaagagcgctttgccggcttcagcttctcgcagaaagccaaggaaaggtcaaagcctaag
cggaaagctcccgccaagactcgcgccgtgcgatttgtagacgttgacctcaacgaggat
gacgtcgaagaagccgaaggggttgcagaagacgattcatcttccgaggacggcgacgaa
gaggaggagcaagaggaagaaggcgatcccagcgaattcattgatgttttggatgtcctg
gacggtcgcggggaatcagatagtgaaactggtatgggaaaagccgagagggaagatcag
gcgagaaggacagcggccggaagtggtgaggaattcgacacagatggggatgaggatatg
gaggactcggccgaagaagatgacgacgacgaagaggaggatgaagaggaggaggcaaag
atcgtctctgcctccgaggacgaaggcgaagatggcgacgatgcgctgcaagagctcgag
agcttcgttaccggtctcgacgctgggcataaacgcaaagcacctgatgatgacgatgca
gcagtagatggtgctgattccaagcctgcgcgaaagcgcaggttactgcccgaattgacc
gaagcaggggtagagaacgagtttgccgctactacaggagacgggaagctcagcctagac
gatcttttggctcctctggagggcggccaatcggcaaatctccaatcgctcaggaagtcg
gcaaaagttcttgcctcaaccgggggaaagatcaagactctttctgcaccgttacctcaa
cgtaccgcggaacgtctcgaccgtgaggctgcatacgagcagactaaggaggaagtcgac
aagtggaaggtcactatgcagcgcatcaaggaggctgagcacttgagcttccctcttcaa
gccgagcccaagagcaggacatcaaacctcgagcttgccgccaagttcaaggcaggtcta
caacacgccgttgacaagctcctcaagtccgcaaagatgcgcgaggacgagatcgcccaa
accgaatccctcaagttgaatcatctctccgtcgaagaagtcgccgcgcgccgcgctgag
ctcgcgaagatgcgcgacctcatgttccgtgccgaagctaaggcgaagcgcatcgcgaaa
atcaagagcaaaacgtatcgccgcatcaagaagaaggagcgcgcgcgtcttgcggagaag
ctaggggagggttcggacgacgacctggatgacgaggaggcgcggctgaagcgcgaggtc
gagcgcgcgagggagcgggcaaccttgaggcacaagaacacgggcaagtgggcgaaggcg
atgcgcgcgcggggcgagctggacgaggaccagcgcagagacatcaacgagatgctggac
aggggcgaaaagctgcggcggaagattcagggccagggtgagagcgacgaggagagcggg
gatgagagtgacgacggggacgatggggagagctttgcacacatcaaggcgaaggcgttc
gacgaactcgctgcgttggacgcggagcagcctgaggcgcctgaaggcaaaaagagcaaa
agtatctttgagatgaagttcatgaaggatgcgatggctcgcgagcagcgcaaggcgaaa
gagatagccgatgacttcgtcaaagagatgggcagcgatcatggtgacgatggcgaggac
gtggacgtggacgtgcagcaagtggcggaggagccgttgaacgtgacggttcagcggaca
ggtgggcgcgtagtctatcgtcctggtgtgatgacatcgggcatgcgacccgctggctct
ctggcttcggatacatcgagcgtaacactgaagtccacggacgttcctccagaaggtttg
ccagaacagtctgcctcgcctccaggctcgcccgtctcacaacgccgtgtcccttccccg
gccgccgaggtcaacccctggctcgctcaagcaagcagctctagcaaaggcctgacgaag
cacgaggtcgctgttagcaaagagagcgccgctgtcgagaagtccaggaacaagctccgc
aaacgccagcagaagcgactcgaggagaaggtgaaggcgcaggaggatgccgaagtcgac
atttccctgtccaccgtcatgaccctgtctgagccttcgaaggcgagcgaaccgtccaaa
gtcactgccttgaagtctgcgcctgctgcggacggcaaggcgaaggcgacctccgccgcc
gacgaggatagtgactcggacgtcaacagcgaactcgaggagcaagagcgggctgccgca
cggaaaagcaagggaaaaggcaaggcgaacggcgtgaaggcgttcgaacaacgcgatctc
gtcgccctcgcttttgccggcgacaatgttgttcaggacttcgccgaggctaaacgccgc
gagatggcagaagacgctccgaaggagattgacaacacacttccaggttggggctcatgg
ggaggcgctggcacgaagaaggccgctcccaaaccgcatctgatcaagaaggtcgcgggg
atcgaccccaagtcgcgtgcagactacaagaaggcgcacgtcataatctcggaaaagcgc
gacaagaaggcagccaagtacctcgtcaaggacctgccgtacccttacacgagtaaggcg
caatttgagcggagtatggaggtcccgctcggcaccgagtggaacacgcgcctcggcttc
cagagggcgacgctgcccaaggtcgtcacaaagatgggaacgctcatcacacccctcgaa
aaactctcatga
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