Dichomitus squalens: DICSQDRAFT_49122
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Entry
DICSQDRAFT_49122 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_49122
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_49122
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
DICSQDRAFT_49122
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
DICSQDRAFT_49122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
18842160
NCBI-ProteinID:
XP_007360920
JGI:
49122
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MGKRLKQVYDAFLVLDVEATCVEGSDFAYPNEIIEWPVCLLRWKDANVKGKTRELEIVAE
FRSFVRPTWRPQLSEFCQALTGITQEQVDSASTFPEVLQDFRKFLEEHELLDEAGHRLAR
FCFCSDGPYDIRDFVVKQCFISKIPVPAWLSGDVMDVRRVVGEWHDANTAAAVERRQVGA
FPLPRRMTFPIPRQLHALGLEPFVGRQHSGIDDTRNICRLVIELARRGWRLEPNTAINPN
RRWPWMGKRGKVLEEYYS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacgtctaaagcaggtatatgatgccttcctcgtgttggacgtggaggcgacc
tgcgttgagggatcagactttgcatatccgaacgaaatcatcgaatggcccgtgtgcctg
ctacggtggaaggatgcgaacgtgaaaggcaagacgcgcgagctcgagattgtcgcggag
ttccgcagctttgtgcggcccacatggcggcctcagctttcggaattctgccaagctcta
acaggtataacgcaggagcaagtggactcggcgtccacctttcctgaggtgctgcaagac
ttccggaagttccttgaggagcacgagctcctcgatgaagccgggcatcgcctagcgcga
ttctgcttctgcagcgatggcccatacgacattcgagactttgtggtgaagcaatgtttc
atctccaagatcccagttccggcctggctaagtggggacgtcatggacgtacgcagagta
gtgggggagtggcatgatgccaacacggcagccgcagtggaacggcgacaggttggcgca
tttcctctccccaggagaatgacgttccccataccccgccagctgcacgcgcttggcttg
gaaccgttcgtgggacggcagcacagcggcatcgatgacacccggaacatctgcagactt
gtcatcgaacttgctaggcgtggctggagactggagcccaataccgctatcaatcccaat
cgacgatggccctggatgggcaagagagggaaggttctcgaagagtattattcttag
DBGET
integrated database retrieval system
